Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R8628_RS03090 | Genome accession | NZ_AP028335 |
| Coordinates | 588337..588720 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-10174 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 583337..593720
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8628_RS03070 (B10174_06020) | - | 583416..585350 (-) | 1935 | WP_052774572.1 | RNB domain-containing ribonuclease | - |
| R8628_RS03075 (B10174_06030) | ilvC | 585469..586491 (+) | 1023 | WP_052774571.1 | ketol-acid reductoisomerase | - |
| R8628_RS03080 (B10174_06040) | - | 586495..587577 (+) | 1083 | WP_002869356.1 | divergent polysaccharide deacetylase family protein | - |
| R8628_RS03085 (B10174_06050) | dprA | 587567..588340 (+) | 774 | WP_052774570.1 | DNA-processing protein DprA | Machinery gene |
| R8628_RS03090 (B10174_06060) | dprB | 588337..588720 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R8628_RS03095 (B10174_06070) | - | 588749..589588 (+) | 840 | WP_002859985.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R8628_RS03100 (B10174_06080) | msrA | 589764..590261 (-) | 498 | WP_002898554.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R8628_RS03105 (B10174_06090) | ppa | 590302..590820 (-) | 519 | WP_002867724.1 | inorganic diphosphatase | - |
| R8628_RS03110 (B10174_06100) | adk | 590830..591408 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| R8628_RS03115 (B10174_06110) | aspS | 591405..593156 (-) | 1752 | WP_002890710.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=92661 R8628_RS03090 WP_002852281.1 588337..588720(+) (dprB) [Campylobacter jejuni strain BCH-10174]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=92661 R8628_RS03090 WP_002852281.1 588337..588720(+) (dprB) [Campylobacter jejuni strain BCH-10174]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TTATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TTATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |