Detailed information NTG0926265

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB6W67_RS03375
• Genome accession: NZ_CP163516
• Coordinates: 694514..695539 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate FELIX_MS516
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 689514..700539

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB6W67_RS03345 (AB6W67_03345)	zapB	689598..689843 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AB6W67_RS03350 (AB6W67_03350)	rraA	689928..690413 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AB6W67_RS03355 (AB6W67_03355)	menA	690506..691432 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AB6W67_RS03360 (AB6W67_03360)	hslU	691499..692830 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AB6W67_RS03365 (AB6W67_03365)	hslV	692840..693370 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AB6W67_RS03370 (AB6W67_03370)	ftsN	693463..694422 (-)	960	WP_000068828.1	cell division protein FtsN	-
AB6W67_RS03375 (AB6W67_03375)	cytR	694514..695539 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AB6W67_RS03380 (AB6W67_03380)	priA	695695..697893 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
AB6W67_RS03385 (AB6W67_03385)	rpmE	698096..698308 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
AB6W67_RS03390 (AB6W67_03390)	yiiX	698369..698977 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AB6W67_RS03395 (AB6W67_03395)	metJ	699161..699478 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=926265 AB6W67_RS03375 WP_000644904.1 694514..695539(-) (cytR) [Escherichia coli isolate FELIX_MS516]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=926265 AB6W67_RS03375 WP_000644904.1 694514..695539(-) (cytR) [Escherichia coli isolate FELIX_MS516]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628