Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | QUE39_RS10040 | Genome accession | NZ_AP025540 |
| Coordinates | 1844514..1844822 (+) | Length | 102 a.a. |
| NCBI ID | WP_024119555.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain HB8_001 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1839514..1849822
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE39_RS10010 (TthHB8_19470) | - | 1840595..1841059 (+) | 465 | WP_011229049.1 | hypothetical protein | - |
| QUE39_RS10015 (TthHB8_19480) | pfkA | 1841036..1842004 (-) | 969 | WP_011173968.1 | 6-phosphofructokinase | - |
| QUE39_RS10020 (TthHB8_19490) | rsmI | 1842001..1842795 (-) | 795 | WP_011229050.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| QUE39_RS10025 (TthHB8_19500) | - | 1842797..1843291 (-) | 495 | WP_011229051.1 | hypothetical protein | - |
| QUE39_RS10030 (TthHB8_19510) | - | 1843355..1843882 (-) | 528 | WP_011173971.1 | inorganic diphosphatase | - |
| QUE39_RS10035 (TthHB8_19520) | - | 1843915..1844541 (+) | 627 | WP_011173972.1 | YcxB family protein | - |
| QUE39_RS10040 (TthHB8_19530) | comEA | 1844514..1844822 (+) | 309 | WP_024119555.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| QUE39_RS10045 (TthHB8_19540) | comA/comEC | 1844819..1846852 (+) | 2034 | WP_011229052.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| QUE39_RS10050 (TthHB8_19550) | - | 1846840..1847649 (-) | 810 | WP_011229053.1 | ParB/RepB/Spo0J family partition protein | - |
| QUE39_RS10055 (TthHB8_19560) | soj | 1847633..1848382 (-) | 750 | WP_011229054.1 | chromosome-partitioning ATPase Soj | - |
| QUE39_RS10060 (TthHB8_19570) | rsmG | 1848376..1849125 (-) | 750 | WP_143591821.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 10947.23 Da Isoelectric Point: 10.3435
>NTDB_id=92624 QUE39_RS10040 WP_024119555.1 1844514..1844822(+) (comEA) [Thermus thermophilus strain HB8_001]
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
Nucleotide
Download Length: 309 bp
>NTDB_id=92624 QUE39_RS10040 WP_024119555.1 1844514..1844822(+) (comEA) [Thermus thermophilus strain HB8_001]
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAAGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTTCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAAGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTTCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
100 |
100 |
1 |
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
39.815 |
100 |
0.422 |