Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   AB4K06_RS23200 Genome accession   NZ_CP163458
Coordinates   4417483..4418277 (-) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis strain N33     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4412483..4423277
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4K06_RS23175 (AB4K06_23175) rocD 4412933..4414138 (-) 1206 WP_003242970.1 ornithine aminotransferase -
  AB4K06_RS23180 (AB4K06_23180) rocR 4414379..4415764 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  AB4K06_RS23185 (AB4K06_23185) - 4415746..4415934 (-) 189 Protein_4519 ATP-binding protein -
  AB4K06_RS23190 (AB4K06_23190) - 4416051..4416179 (-) 129 WP_003242634.1 hypothetical protein -
  AB4K06_RS23195 (AB4K06_23195) htrA 4416199..4417401 (-) 1203 WP_009969578.1 serine protease HtrC Regulator
  AB4K06_RS23200 (AB4K06_23200) vicX 4417483..4418277 (-) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  AB4K06_RS23205 (AB4K06_23205) walI 4418299..4419141 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  AB4K06_RS23210 (AB4K06_23210) walH 4419128..4420495 (-) 1368 WP_003242498.1 WalRK two-component regulatory system regulator WalH -
  AB4K06_RS23215 (AB4K06_23215) walK 4420485..4422320 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  AB4K06_RS23220 (AB4K06_23220) walR 4422328..4423035 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=926239 AB4K06_RS23200 WP_003242676.1 4417483..4418277(-) (vicX) [Bacillus subtilis strain N33]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=926239 AB4K06_RS23200 WP_003242676.1 4417483..4418277(-) (vicX) [Bacillus subtilis strain N33]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53