Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilA1 | Type | Machinery gene |
| Locus tag | QUE39_RS06205 | Genome accession | NZ_AP025540 |
| Coordinates | 1160183..1160653 (+) | Length | 156 a.a. |
| NCBI ID | WP_011228522.1 | Uniprot ID | Q5SIZ8 |
| Organism | Thermus thermophilus strain HB8_001 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1155183..1165653
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE39_RS06185 (TthHB8_12000) | ilvC | 1155683..1156696 (-) | 1014 | WP_011173279.1 | ketol-acid reductoisomerase | - |
| QUE39_RS06190 (TthHB8_12010) | ilvN | 1156693..1157205 (-) | 513 | WP_011173280.1 | acetolactate synthase small subunit | - |
| QUE39_RS06195 (TthHB8_12020) | ilvB | 1157202..1158890 (-) | 1689 | WP_011228519.1 | biosynthetic-type acetolactate synthase large subunit | - |
| QUE39_RS06200 (TthHB8_12030) | - | 1159045..1160025 (-) | 981 | WP_011228521.1 | YpdA family putative bacillithiol disulfide reductase | - |
| QUE39_RS06205 (TthHB8_12040) | pilA/pilA1 | 1160183..1160653 (+) | 471 | WP_011228522.1 | GspH/FimT family protein | Machinery gene |
| QUE39_RS06210 (TthHB8_12050) | - | 1160738..1161175 (+) | 438 | WP_231834457.1 | GspH/FimT family protein | - |
| QUE39_RS06215 (TthHB8_12060) | - | 1161201..1161533 (+) | 333 | WP_224065211.1 | prepilin | - |
| QUE39_RS06220 (TthHB8_12070) | - | 1161530..1162240 (+) | 711 | WP_011228525.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| QUE39_RS06225 (TthHB8_12080) | - | 1162254..1163753 (+) | 1500 | WP_011228526.1 | pilus assembly PilX N-terminal domain-containing protein | - |
| QUE39_RS06230 (TthHB8_12090) | - | 1164026..1164394 (+) | 369 | WP_011228527.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| QUE39_RS06235 (TthHB8_12100) | - | 1164453..1164824 (+) | 372 | WP_011228528.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 16937.73 Da Isoelectric Point: 11.7108
>NTDB_id=92614 QUE39_RS06205 WP_011228522.1 1160183..1160653(+) (pilA/pilA1) [Thermus thermophilus strain HB8_001]
MTRRGLTLLELLLVLGILGVFLGLALPLLSPNRLALDQAARSLATQVTRARLEAIRRNAFVGLQVFTEGAGGYLLFVDQN
ANRRYDPGEEFGATRFGQGNWARVRLDPEKSALGNMPLLFDPRGIPAKPITATLVLTSGGATRKVVISQQGRARLE
MTRRGLTLLELLLVLGILGVFLGLALPLLSPNRLALDQAARSLATQVTRARLEAIRRNAFVGLQVFTEGAGGYLLFVDQN
ANRRYDPGEEFGATRFGQGNWARVRLDPEKSALGNMPLLFDPRGIPAKPITATLVLTSGGATRKVVISQQGRARLE
Nucleotide
Download Length: 471 bp
>NTDB_id=92614 QUE39_RS06205 WP_011228522.1 1160183..1160653(+) (pilA/pilA1) [Thermus thermophilus strain HB8_001]
ATGACTCGGCGGGGCCTTACCCTTTTGGAGCTCCTGCTGGTCTTGGGCATCCTGGGGGTCTTCCTAGGGCTGGCCCTTCC
ACTTCTTTCCCCCAACCGCCTCGCCCTGGACCAGGCCGCCCGCTCCCTCGCCACCCAGGTGACCCGGGCAAGGCTCGAGG
CCATCCGCCGGAACGCCTTCGTGGGCCTTCAGGTGTTCACCGAAGGAGCGGGGGGTTACCTGCTCTTCGTGGACCAAAAC
GCCAACCGCCGCTACGACCCCGGGGAGGAGTTCGGCGCGACCCGCTTCGGCCAAGGGAACTGGGCCCGAGTGCGCCTGGA
CCCGGAGAAGAGCGCCCTCGGCAACATGCCCCTCCTCTTTGACCCCCGGGGCATCCCGGCCAAGCCCATCACCGCCACGC
TCGTCCTCACCTCAGGGGGCGCCACCCGCAAGGTGGTCATCTCCCAGCAGGGCCGGGCCCGCCTGGAGTGA
ATGACTCGGCGGGGCCTTACCCTTTTGGAGCTCCTGCTGGTCTTGGGCATCCTGGGGGTCTTCCTAGGGCTGGCCCTTCC
ACTTCTTTCCCCCAACCGCCTCGCCCTGGACCAGGCCGCCCGCTCCCTCGCCACCCAGGTGACCCGGGCAAGGCTCGAGG
CCATCCGCCGGAACGCCTTCGTGGGCCTTCAGGTGTTCACCGAAGGAGCGGGGGGTTACCTGCTCTTCGTGGACCAAAAC
GCCAACCGCCGCTACGACCCCGGGGAGGAGTTCGGCGCGACCCGCTTCGGCCAAGGGAACTGGGCCCGAGTGCGCCTGGA
CCCGGAGAAGAGCGCCCTCGGCAACATGCCCCTCCTCTTTGACCCCCGGGGCATCCCGGCCAAGCCCATCACCGCCACGC
TCGTCCTCACCTCAGGGGGCGCCACCCGCAAGGTGGTCATCTCCCAGCAGGGCCGGGCCCGCCTGGAGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilA1 | Thermus thermophilus HB27 |
98.718 |
100 |
0.987 |