Detailed information NTG0926048

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: OX462_RS23905
• Genome accession: NZ_CP142524
• Coordinates: 5330550..5331605 (+)
• Length: 351 a.a.
• NCBI ID: WP_099409837.1
• Uniprot ID: -
• Organism: Janthinobacterium sp. SUN098
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5325550..5336605

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OX462_RS23885 (OX462_23885)	-	5325895..5327142 (-)	1248	WP_409027225.1	class I SAM-dependent methyltransferase	-
OX462_RS23890 (OX462_23890)	-	5327139..5327936 (-)	798	WP_409027226.1	DUF1365 domain-containing protein	-
OX462_RS23895 (OX462_23895)	-	5327926..5329239 (-)	1314	WP_409027227.1	NAD(P)/FAD-dependent oxidoreductase	-
OX462_RS23900 (OX462_23900)	-	5329444..5330385 (+)	942	WP_070222512.1	MerR family transcriptional regulator	-
OX462_RS23905 (OX462_23905)	pilA	5330550..5331605 (+)	1056	WP_099409837.1	signal recognition particle-docking protein FtsY	Machinery gene
OX462_RS23910 (OX462_23910)	-	5331614..5332357 (+)	744	WP_070222516.1	cell division ATP-binding protein FtsE	-
OX462_RS23915 (OX462_23915)	ftsX	5332354..5333274 (+)	921	WP_070222518.1	permease-like cell division protein FtsX	-
OX462_RS23920 (OX462_23920)	rpoH	5333685..5334578 (+)	894	WP_070222520.1	RNA polymerase sigma factor RpoH	-
OX462_RS23925 (OX462_23925)	-	5334668..5334934 (-)	267	WP_070290134.1	hypothetical protein	-
OX462_RS23930 (OX462_23930)	-	5335112..5335564 (+)	453	WP_070290132.1	hypothetical protein	-
OX462_RS23935 (OX462_23935)	-	5335561..5335908 (-)	348	WP_070290131.1	antibiotic biosynthesis monooxygenase	-

Sequence

Protein

• Length: 351 a.a.
• Molecular weight: 37311.62 Da
• Isoelectric Point: 6.8952

>NTDB_id=926048 OX462_RS23905 WP_099409837.1 5330550..5331605(+) (pilA) [Janthinobacterium sp. SUN098]
MFSFFKKKPIAPEAAPAEPLVLPATPPAPQPAATPLSGAPAELVPVIVAAEPEKKSWMTRLKAGLSKTSNTLSVLFVGAK
IDDALYEELEAALLMSDAGIDATEFLLTELKKKVKEDKLLDAAAVKAALKVLLIELLSPLEKRFELGRHKPLVMMISGVN
GAGKTTTIGKLAKHMQSNNQSVLLAAGDTFRAAAREQLMVWGERNNVTVISQESGDPAAVAYDSVQSAKARGIDVVMVDT
AGRLPTQLHLMEELKKIKRVIGKGMEGAPHETLLVIDGNTGQNALTQVKAFDDALQLSGLVITKLDGTAKGGVLAAIARV
RPVPVYFIGIGEKIEDLQPFVAAEFVEALLG

Nucleotide

• Length: 1056 bp

>NTDB_id=926048 OX462_RS23905 WP_099409837.1 5330550..5331605(+) (pilA) [Janthinobacterium sp. SUN098]
ATGTTTAGTTTCTTCAAGAAAAAACCCATCGCTCCCGAGGCCGCACCAGCCGAGCCCCTCGTCCTTCCCGCCACGCCGCC
CGCACCGCAGCCAGCCGCTACGCCCCTGAGCGGCGCGCCGGCCGAGCTCGTGCCCGTGATCGTGGCCGCCGAACCCGAGA
AAAAATCGTGGATGACGCGCCTGAAGGCGGGCCTGTCGAAAACCTCGAACACCTTGTCCGTGCTGTTCGTCGGCGCGAAG
ATCGACGACGCCCTGTACGAAGAGCTGGAAGCGGCGCTGCTGATGTCCGACGCCGGCATCGACGCCACCGAATTCCTGCT
CACGGAATTGAAGAAAAAGGTCAAGGAAGACAAGCTGCTCGACGCAGCCGCCGTCAAGGCCGCGCTGAAAGTGCTGCTGA
TCGAGCTGCTCTCGCCGCTGGAAAAGCGCTTCGAGCTGGGCCGCCACAAGCCGCTGGTGATGATGATTTCCGGCGTCAAT
GGCGCGGGCAAGACCACCACCATCGGCAAGCTGGCCAAGCACATGCAGTCGAACAACCAGTCCGTGCTGCTGGCCGCGGG
CGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGATGGTCTGGGGCGAGCGCAACAACGTTACCGTGATTTCGCAGGAAT
CGGGCGACCCGGCCGCCGTGGCCTACGACTCCGTGCAATCGGCGAAGGCGCGCGGCATCGACGTGGTCATGGTCGACACG
GCCGGCCGCCTGCCGACGCAGTTGCACTTGATGGAAGAATTGAAGAAAATCAAGCGCGTGATCGGCAAGGGCATGGAGGG
CGCACCGCATGAAACCCTGCTCGTCATCGACGGCAACACGGGCCAGAACGCCCTCACGCAAGTGAAGGCCTTCGACGATG
CCCTGCAGCTGAGCGGCCTGGTGATCACCAAGCTGGACGGTACCGCCAAGGGCGGCGTGCTGGCGGCGATTGCCCGCGTG
CGCCCCGTGCCCGTGTATTTCATCGGCATCGGTGAGAAAATTGAAGACTTGCAGCCTTTCGTGGCTGCCGAATTTGTCGA
AGCGCTGCTCGGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (152-351)

• SRP54-type protein, helical bundle domain (SRP54_N) (70-130)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.402	93.447	0.527