Detailed information NTG0926025

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: OPV09_RS05835
• Genome accession: NZ_CP142523
• Coordinates: 1277074..1278141 (-)
• Length: 355 a.a.
• NCBI ID: WP_072456899.1
• Uniprot ID: A0AB38CFU7
• Organism: Janthinobacterium sp. TB1-E2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1272074..1283141

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OPV09_RS05805 (OPV09_05805)	-	1272778..1273125 (+)	348	WP_319993370.1	antibiotic biosynthesis monooxygenase	-
OPV09_RS05810 (OPV09_05810)	-	1273129..1273581 (-)	453	WP_338680859.1	hypothetical protein	-
OPV09_RS05815 (OPV09_05815)	-	1273760..1274026 (+)	267	WP_338680860.1	hypothetical protein	-
OPV09_RS05820 (OPV09_05820)	rpoH	1274117..1275016 (-)	900	WP_175444620.1	RNA polymerase sigma factor RpoH	-
OPV09_RS05825 (OPV09_05825)	ftsX	1275403..1276323 (-)	921	WP_070305692.1	permease-like cell division protein FtsX	-
OPV09_RS05830 (OPV09_05830)	-	1276320..1277063 (-)	744	WP_338680861.1	ATP-binding cassette domain-containing protein	-
OPV09_RS05835 (OPV09_05835)	pilA	1277074..1278141 (-)	1068	WP_072456899.1	signal recognition particle-docking protein FtsY	Machinery gene
OPV09_RS05840 (OPV09_05840)	-	1278306..1279247 (-)	942	WP_034748932.1	MerR family transcriptional regulator	-
OPV09_RS05845 (OPV09_05845)	-	1279451..1280761 (+)	1311	WP_070305684.1	FAD-dependent oxidoreductase	-
OPV09_RS05850 (OPV09_05850)	-	1280751..1281548 (+)	798	WP_331778602.1	DUF1365 domain-containing protein	-
OPV09_RS05855 (OPV09_05855)	-	1281545..1282792 (+)	1248	WP_331778601.1	cyclopropane-fatty-acyl-phospholipid synthase family protein	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 37554.84 Da
• Isoelectric Point: 6.5171

>NTDB_id=926025 OPV09_RS05835 WP_072456899.1 1277074..1278141(-) (pilA) [Janthinobacterium sp. TB1-E2]
MFSFFKKKPIAPEAAPAEPLVLPAATPPAAPAAAPSAEPLSGAPAELVPVIVAAEPEKKSWMTRLKAGLSKTSNTLSVLF
VGAKIDDALYEELEAALLMSDAGIDATEFLLTELKKKVKEDKLLDAAAVKAALKVLLIDLLSPLEKRFELGRHKPLVMMI
SGVNGAGKTTTIGKLAKHMQSNNQSVLLAAGDTFRAAAREQLMVWGERNNVTVISQESGDPAAVAYDSVQSAKARGIDVV
MVDTAGRLPTQLHLMEELKKIKRVIGKGMDGAPHETLLVIDGNTGQNALTQVKAFDDALQLSGLVITKLDGTAKGGVLAA
IARVRPVPVYFIGIGEKIEDLQPFVAAEFVEALLG

Nucleotide

• Length: 1068 bp

>NTDB_id=926025 OPV09_RS05835 WP_072456899.1 1277074..1278141(-) (pilA) [Janthinobacterium sp. TB1-E2]
ATGTTTAGTTTCTTCAAGAAAAAACCCATCGCTCCCGAGGCTGCGCCAGCCGAGCCTCTCGTCCTTCCCGCCGCCACGCC
GCCTGCCGCGCCAGCAGCAGCCCCGTCCGCTGAACCGCTGAGCGGCGCGCCGGCCGAGCTCGTGCCCGTGATCGTGGCCG
CCGAACCCGAGAAAAAATCGTGGATGACGCGCCTGAAGGCCGGCTTGTCGAAAACCTCGAACACCTTGTCCGTGCTGTTC
GTCGGCGCGAAGATCGACGACGCCCTGTACGAAGAGCTGGAAGCGGCCCTGCTGATGTCCGACGCGGGCATCGACGCCAC
GGAATTCCTGCTCACGGAATTGAAGAAAAAGGTCAAGGAAGACAAGCTGCTCGATGCCGCCGCCGTCAAGGCCGCGCTGA
AAGTGCTGCTGATCGACCTGCTCTCGCCACTGGAAAAGCGCTTCGAGCTGGGCCGCCACAAGCCGCTCGTGATGATGATT
TCCGGCGTGAATGGCGCCGGCAAGACCACCACCATCGGCAAGCTCGCCAAGCACATGCAGTCGAACAACCAGTCCGTGCT
GCTGGCTGCGGGCGACACCTTCCGCGCCGCCGCGCGCGAACAGCTGATGGTCTGGGGCGAGCGCAACAACGTTACCGTGA
TTTCGCAGGAATCGGGCGACCCGGCCGCCGTGGCCTACGACTCCGTGCAATCGGCGAAAGCGCGCGGCATCGACGTGGTG
ATGGTCGACACGGCGGGCCGCTTGCCCACGCAGTTGCACCTGATGGAAGAATTGAAGAAAATCAAGCGCGTGATCGGCAA
GGGCATGGATGGCGCGCCGCATGAAACCCTGCTCGTCATCGACGGCAACACAGGCCAGAACGCCCTCACGCAAGTGAAGG
CGTTCGACGATGCCCTGCAGTTAAGCGGCCTGGTGATCACCAAGCTGGACGGCACCGCCAAGGGCGGCGTGCTGGCGGCG
ATAGCCCGCGTGCGTCCCGTGCCCGTGTACTTCATCGGCATCGGTGAGAAAATTGAAGACTTGCAGCCGTTCGTGGCTGC
CGAATTTGTCGAAGCGCTGCTCGGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (156-355)

• SRP54-type protein, helical bundle domain (SRP54_N) (74-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	57.585	90.986	0.524