Detailed information NTG0925954

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB6N08_RS17010
• Genome accession: NZ_CP163448
• Coordinates: 3452450..3453475 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli O102:H6 strain M2021_10044824_1_E
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3447450..3458475

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB6N08_RS16980 (AB6N08_16975)	zapB	3447534..3447779 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AB6N08_RS16985 (AB6N08_16980)	rraA	3447864..3448349 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AB6N08_RS16990 (AB6N08_16985)	menA	3448442..3449368 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AB6N08_RS16995 (AB6N08_16990)	hslU	3449435..3450766 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
AB6N08_RS17000 (AB6N08_16995)	hslV	3450776..3451306 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AB6N08_RS17005 (AB6N08_17000)	ftsN	3451399..3452358 (-)	960	WP_000068834.1	cell division protein FtsN	-
AB6N08_RS17010 (AB6N08_17005)	cytR	3452450..3453475 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AB6N08_RS17015 (AB6N08_17010)	priA	3453631..3455829 (-)	2199	WP_057950787.1	primosomal protein N'	Machinery gene
AB6N08_RS17020 (AB6N08_17015)	rpmE	3456032..3456244 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=925954 AB6N08_RS17010 WP_000644904.1 3452450..3453475(-) (cytR) [Escherichia coli O102:H6 strain M2021_10044824_1_E]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=925954 AB6N08_RS17010 WP_000644904.1 3452450..3453475(-) (cytR) [Escherichia coli O102:H6 strain M2021_10044824_1_E]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628