Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R8663_RS03090 | Genome accession | NZ_AP028331 |
| Coordinates | 597407..597790 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-10091 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 592407..602790
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8663_RS03070 (B10091_06030) | - | 592486..594420 (-) | 1935 | WP_002852122.1 | RNB domain-containing ribonuclease | - |
| R8663_RS03075 (B10091_06040) | ilvC | 594539..595561 (+) | 1023 | WP_002858483.1 | ketol-acid reductoisomerase | - |
| R8663_RS03080 (B10091_06050) | - | 595565..596647 (+) | 1083 | WP_002859983.1 | divergent polysaccharide deacetylase family protein | - |
| R8663_RS03085 (B10091_06060) | dprA | 596637..597410 (+) | 774 | WP_002868431.1 | DNA-processing protein DprA | Machinery gene |
| R8663_RS03090 (B10091_06070) | dprB | 597407..597790 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R8663_RS03095 (B10091_06080) | - | 597819..598658 (+) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R8663_RS03100 (B10091_06090) | msrA | 598834..599331 (-) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R8663_RS03105 (B10091_06100) | ppa | 599373..599891 (-) | 519 | WP_002867724.1 | inorganic diphosphatase | - |
| R8663_RS03110 (B10091_06110) | adk | 599901..600479 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| R8663_RS03115 (B10091_06120) | aspS | 600476..602227 (-) | 1752 | WP_032581037.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=92569 R8663_RS03090 WP_002852281.1 597407..597790(+) (dprB) [Campylobacter jejuni strain BCH-10091]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=92569 R8663_RS03090 WP_002852281.1 597407..597790(+) (dprB) [Campylobacter jejuni strain BCH-10091]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TTATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TTATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |