Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   VP780_RS02620 Genome accession   NZ_CP142380
Coordinates   563029..563439 (+) Length   136 a.a.
NCBI ID   WP_010221498.1    Uniprot ID   A0AAP0XEJ0
Organism   Pseudomonas donghuensis strain ZF510     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 558029..568439
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VP780_RS02595 (VP780_02595) ruvX 558606..559037 (-) 432 WP_010221493.1 Holliday junction resolvase RuvX -
  VP780_RS02600 (VP780_02600) - 559037..559606 (-) 570 WP_010221494.1 YqgE/AlgH family protein -
  VP780_RS02605 (VP780_02605) - 559678..560661 (-) 984 WP_327439465.1 ankyrin repeat domain-containing protein -
  VP780_RS02610 (VP780_02610) - 560746..561651 (-) 906 WP_010221496.1 energy transducer TonB -
  VP780_RS02615 (VP780_02615) gshB 561761..562714 (-) 954 WP_036995450.1 glutathione synthase -
  VP780_RS02620 (VP780_02620) pilG 563029..563439 (+) 411 WP_010221498.1 twitching motility response regulator PilG Regulator
  VP780_RS02625 (VP780_02625) pilH 563482..563847 (+) 366 WP_327439466.1 twitching motility response regulator PilH -
  VP780_RS02630 (VP780_02630) - 563859..564398 (+) 540 WP_412034201.1 chemotaxis protein CheW -
  VP780_RS02635 (VP780_02635) - 564414..566459 (+) 2046 WP_010221501.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14907.22 Da        Isoelectric Point: 5.1866

>NTDB_id=925591 VP780_RS02620 WP_010221498.1 563029..563439(+) (pilG) [Pseudomonas donghuensis strain ZF510]
MEQPGAALKVMVIDDSKTIRRTAQILLSEAGCEVITAIDGFDALAKIIDHQPQIIFVDVLMPRLDGYQTCALIKQNSTFK
DTPVILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIKAHVPGFAAEEQHAP

Nucleotide


Download         Length: 411 bp        

>NTDB_id=925591 VP780_RS02620 WP_010221498.1 563029..563439(+) (pilG) [Pseudomonas donghuensis strain ZF510]
ATGGAACAGCCCGGCGCGGCATTGAAGGTGATGGTGATCGACGACTCCAAGACGATTCGCCGCACCGCCCAGATATTGCT
CAGCGAAGCAGGATGTGAGGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCCAAGATCATCGACCACCAGCCGCAGA
TCATTTTCGTCGACGTGCTGATGCCGCGTCTGGACGGTTACCAGACCTGCGCCCTGATCAAGCAGAACAGCACCTTCAAG
GACACGCCGGTAATTTTGCTGTCGTCTCGCGATGGTCTGTTCGACAAGGCCCGCGGCCGCGTCGTCGGTTCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGACGCAATCAAGGCCCATGTGCCGGGATTCGCCGCAGAAGAACAAC
ACGCACCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

68.8

91.912

0.632