Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   VKP54_RS06655 Genome accession   NZ_CP142356
Coordinates   1330455..1331180 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain CT95-157     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1325455..1336180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP54_RS06620 (VKP54_06620) rnpM 1325489..1325785 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  VKP54_RS06625 (VKP54_06625) nusA 1325801..1326958 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  VKP54_RS06630 (VKP54_06630) rimP 1327133..1327669 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  VKP54_RS06640 (VKP54_06640) trmB 1327928..1328563 (-) 636 WP_111711459.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  VKP54_RS06645 (VKP54_06645) ccrZ 1328563..1329354 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  VKP54_RS06650 (VKP54_06650) - 1329418..1330452 (-) 1035 WP_031577431.1 ABC transporter permease -
  VKP54_RS06655 (VKP54_06655) pptA 1330455..1331180 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  VKP54_RS06660 (VKP54_06660) - 1331252..1331671 (+) 420 WP_002983376.1 HIT family protein -
  VKP54_RS06665 (VKP54_06665) - 1331668..1332024 (+) 357 WP_031488470.1 hypothetical protein -
  VKP54_RS06670 (VKP54_06670) brpA 1332135..1333418 (-) 1284 WP_031488469.1 biofilm formation/cell division transcriptional regulator BrpA -
  VKP54_RS06675 (VKP54_06675) - 1333427..1333951 (-) 525 WP_031488468.1 GNAT family N-acetyltransferase -
  VKP54_RS06680 (VKP54_06680) tsaE 1333926..1334387 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  VKP54_RS06685 (VKP54_06685) - 1334541..1336001 (-) 1461 WP_031488467.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=925338 VKP54_RS06655 WP_002983379.1 1330455..1331180(-) (pptA) [Streptococcus pyogenes strain CT95-157]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=925338 VKP54_RS06655 WP_002983379.1 1330455..1331180(-) (pptA) [Streptococcus pyogenes strain CT95-157]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714