Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   VKP53_RS02310 Genome accession   NZ_CP142354
Coordinates   442558..443283 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain 6745-99     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 437558..448283
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP53_RS02280 (VKP53_02280) - 437737..439197 (+) 1461 WP_032461169.1 NCS2 family permease -
  VKP53_RS02285 (VKP53_02285) tsaE 439351..439812 (+) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  VKP53_RS02290 (VKP53_02290) - 439787..440311 (+) 525 WP_111704937.1 GNAT family N-acetyltransferase -
  VKP53_RS02295 (VKP53_02295) brpA 440320..441603 (+) 1284 WP_115368387.1 biofilm formation/cell division transcriptional regulator BrpA -
  VKP53_RS02300 (VKP53_02300) - 441714..442070 (-) 357 WP_014407784.1 hypothetical protein -
  VKP53_RS02305 (VKP53_02305) - 442067..442486 (-) 420 WP_326674965.1 HIT family protein -
  VKP53_RS02310 (VKP53_02310) pptA 442558..443283 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  VKP53_RS02315 (VKP53_02315) - 443286..444320 (+) 1035 WP_010922583.1 ABC transporter permease -
  VKP53_RS02320 (VKP53_02320) ccrZ 444384..445175 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  VKP53_RS02325 (VKP53_02325) trmB 445175..445810 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  VKP53_RS02335 (VKP53_02335) rimP 446069..446605 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  VKP53_RS02340 (VKP53_02340) nusA 446780..447937 (+) 1158 WP_002983485.1 transcription termination factor NusA -
  VKP53_RS02345 (VKP53_02345) rnpM 447953..448249 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=925209 VKP53_RS02310 WP_002983379.1 442558..443283(+) (pptA) [Streptococcus pyogenes strain 6745-99]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=925209 VKP53_RS02310 WP_002983379.1 442558..443283(+) (pptA) [Streptococcus pyogenes strain 6745-99]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714