Detailed information NTG0925135

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB5J48_RS31360
• Genome accession: NZ_CP163433
• Coordinates: 7010289..7011302 (-)
• Length: 337 a.a.
• NCBI ID: WP_006131434.1
• Uniprot ID: M3BZF1
• Organism: Streptomyces sp. R17
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 7005289..7016302

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB5J48_RS31330 (AB5J48_31330)	-	7005550..7006311 (+)	762	WP_369153260.1	DeoR/GlpR family DNA-binding transcription regulator	-
AB5J48_RS31335 (AB5J48_31335)	-	7006386..7007162 (-)	777	WP_369153261.1	GNAT family N-acetyltransferase	-
AB5J48_RS31340 (AB5J48_31340)	-	7007631..7008008 (+)	378	WP_369153262.1	DUF4406 domain-containing protein	-
AB5J48_RS31345 (AB5J48_31345)	-	7008307..7009023 (-)	717	WP_228731522.1	DUF4328 domain-containing protein	-
AB5J48_RS31350 (AB5J48_31350)	-	7009402..7009818 (+)	417	WP_031020960.1	biotin transporter BioY	-
AB5J48_RS31355 (AB5J48_31355)	-	7009852..7010280 (-)	429	WP_086682607.1	glutaredoxin domain-containing protein	-
AB5J48_RS31360 (AB5J48_31360)	cytR	7010289..7011302 (-)	1014	WP_006131434.1	LacI family DNA-binding transcriptional regulator	Regulator
AB5J48_RS31365 (AB5J48_31365)	-	7011603..7012910 (+)	1308	WP_006131433.1	ABC transporter substrate-binding protein	-
AB5J48_RS31370 (AB5J48_31370)	-	7013000..7013995 (+)	996	WP_006131432.1	carbohydrate ABC transporter permease	-
AB5J48_RS31375 (AB5J48_31375)	-	7014008..7014931 (+)	924	WP_006131431.1	carbohydrate ABC transporter permease	-

Sequence

Protein

• Length: 337 a.a.
• Molecular weight: 36030.88 Da
• Isoelectric Point: 7.0013

>NTDB_id=925135 AB5J48_RS31360 WP_006131434.1 7010289..7011302(-) (cytR) [Streptomyces sp. R17]
MTGNRRPTIKTVAARAGVGRTTVSRVVNGSDLVSADARARVLAAIKELNYVPNSVARGLVTNRTNAVALVIPESESRLGS
EPFFAALIRGVSGALAESGTQLQLMLVRDQAERDQLTESVATRRVDGVLLVSVHSEDRLPGTLEEMGLPVVLAGRRDAGE
QLSYVNADNAAGAAEAVRHLLGRGRRRIATITGPQDMDVGRARLAGWHTAHQEAGVPADGSLIEAGDFTEDSGGRAMRLL
LERAPDLDAVFAASDLMAVGALAELRRRKRRVPDDVAVVGFEDSVLARHTNPPLTTVRQPVEELGRTMARILTDITLNDG
PRQQITLPAELVVRESS

Nucleotide

• Length: 1014 bp

>NTDB_id=925135 AB5J48_RS31360 WP_006131434.1 7010289..7011302(-) (cytR) [Streptomyces sp. R17]
ATGACGGGCAACCGCCGTCCCACGATCAAGACCGTCGCCGCCCGCGCCGGCGTGGGGCGCACCACGGTCTCCCGCGTCGT
CAACGGCTCCGACCTGGTCAGCGCCGACGCGCGGGCCCGCGTCCTGGCGGCGATCAAAGAACTGAACTACGTCCCCAACT
CGGTCGCCCGCGGCCTGGTCACCAACCGCACCAACGCCGTGGCCCTGGTCATCCCGGAGTCGGAGAGCCGGCTCGGCTCG
GAGCCGTTCTTCGCCGCGCTGATCCGCGGCGTGAGCGGCGCGCTCGCGGAGAGCGGCACGCAGCTGCAGCTGATGCTGGT
ACGCGACCAGGCCGAACGCGATCAGCTCACCGAGTCGGTGGCCACCCGCCGGGTGGACGGCGTGCTGCTGGTCTCCGTGC
ACTCCGAGGACCGGTTGCCCGGCACCCTCGAGGAGATGGGCCTGCCCGTCGTGCTCGCCGGCCGCCGCGACGCGGGCGAG
CAGCTGAGCTACGTGAACGCCGACAACGCCGCGGGCGCCGCCGAGGCCGTACGGCATCTGCTGGGCCGCGGGCGGCGGCG
GATCGCGACGATCACCGGCCCGCAGGACATGGACGTCGGCCGCGCCCGTCTCGCGGGGTGGCACACCGCGCACCAGGAAG
CGGGCGTTCCGGCGGACGGGTCGCTGATCGAGGCGGGCGACTTCACCGAGGACAGCGGCGGCCGCGCCATGCGTTTGCTT
CTTGAACGCGCGCCGGATCTGGACGCCGTCTTCGCCGCGTCGGACCTCATGGCGGTGGGCGCGCTGGCCGAATTGCGCCG
CCGGAAGCGCCGCGTGCCGGACGACGTGGCCGTGGTCGGCTTCGAGGACTCGGTGCTCGCCCGGCACACCAACCCGCCGC
TGACGACGGTGCGTCAGCCGGTGGAGGAACTGGGCCGCACGATGGCCCGCATCCTCACCGACATCACCCTGAACGACGGC
CCCCGGCAACAGATCACGCTGCCCGCGGAGCTGGTCGTCCGCGAGTCGTCATAG

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (8-53)

• Periplasmic binding protein-like domain (Peripla_BP_3) (177-337)

3D structure

• AlphaFold DB: M3BZF1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	35.26	100	0.362
cytR	Vibrio parahaemolyticus RIMD 2210633	34.857	100	0.362