Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   VKP38_RS08685 Genome accession   NZ_CP142352
Coordinates   1749573..1750286 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain 2907-97     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1744573..1755286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP38_RS08675 (VKP38_08675) treC 1745643..1747271 (-) 1629 WP_115233472.1 alpha,alpha-phosphotrehalase -
  VKP38_RS08680 (VKP38_08680) treP 1747338..1749362 (-) 2025 WP_032464616.1 PTS system trehalose-specific EIIBC component -
  VKP38_RS08685 (VKP38_08685) treR 1749573..1750286 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  VKP38_RS08690 (VKP38_08690) - 1750565..1750896 (-) 332 Protein_1658 winged helix-turn-helix transcriptional regulator -
  VKP38_RS08695 (VKP38_08695) - 1751082..1751939 (+) 858 WP_032464618.1 VOC family protein -
  VKP38_RS08700 (VKP38_08700) yaaA 1751981..1752712 (+) 732 WP_011055084.1 peroxide stress protein YaaA -
  VKP38_RS08705 (VKP38_08705) nrdG 1752886..1753500 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  VKP38_RS08710 (VKP38_08710) - 1753500..1754009 (-) 510 WP_032464619.1 GNAT family N-acetyltransferase -
  VKP38_RS08715 (VKP38_08715) - 1754018..1754953 (-) 936 WP_063629153.1 Gfo/Idh/MocA family protein -
  VKP38_RS08720 (VKP38_08720) - 1754982..1755128 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=925127 VKP38_RS08685 WP_002982243.1 1749573..1750286(+) (treR) [Streptococcus pyogenes strain 2907-97]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=925127 VKP38_RS08685 WP_002982243.1 1749573..1750286(+) (treR) [Streptococcus pyogenes strain 2907-97]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679