Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   VKP38_RS02430 Genome accession   NZ_CP142352
Coordinates   458233..458958 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain 2907-97     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 453233..463958
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP38_RS02400 (VKP38_02400) - 453412..454872 (+) 1461 WP_012560892.1 NCS2 family permease -
  VKP38_RS02405 (VKP38_02405) tsaE 455026..455487 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  VKP38_RS02410 (VKP38_02410) - 455462..455986 (+) 525 WP_020905405.1 GNAT family N-acetyltransferase -
  VKP38_RS02415 (VKP38_02415) brpA 455995..457278 (+) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  VKP38_RS02420 (VKP38_02420) - 457389..457745 (-) 357 WP_032464516.1 hypothetical protein -
  VKP38_RS02425 (VKP38_02425) - 457742..458161 (-) 420 WP_002983376.1 HIT family protein -
  VKP38_RS02430 (VKP38_02430) pptA 458233..458958 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  VKP38_RS02435 (VKP38_02435) - 458961..459995 (+) 1035 WP_010922583.1 ABC transporter permease -
  VKP38_RS02440 (VKP38_02440) ccrZ 460059..460850 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  VKP38_RS02445 (VKP38_02445) trmB 460850..461485 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  VKP38_RS02455 (VKP38_02455) rimP 461744..462280 (+) 537 WP_196198777.1 ribosome maturation factor RimP -
  VKP38_RS02460 (VKP38_02460) nusA 462455..463612 (+) 1158 WP_002994325.1 transcription termination factor NusA -
  VKP38_RS02465 (VKP38_02465) rnpM 463628..463924 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=925097 VKP38_RS02430 WP_002983379.1 458233..458958(+) (pptA) [Streptococcus pyogenes strain 2907-97]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=925097 VKP38_RS02430 WP_002983379.1 458233..458958(+) (pptA) [Streptococcus pyogenes strain 2907-97]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714