Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   VKP56_RS08470 Genome accession   NZ_CP142350
Coordinates   1700581..1701294 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain SS1445     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1695581..1706294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP56_RS08460 (VKP56_08460) treC 1696651..1698279 (-) 1629 WP_326657010.1 alpha,alpha-phosphotrehalase -
  VKP56_RS08465 (VKP56_08465) treP 1698346..1700370 (-) 2025 WP_115354327.1 PTS system trehalose-specific EIIBC component -
  VKP56_RS08470 (VKP56_08470) treR 1700581..1701294 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  VKP56_RS08475 (VKP56_08475) - 1701572..1701903 (-) 332 Protein_1613 winged helix-turn-helix transcriptional regulator -
  VKP56_RS08480 (VKP56_08480) - 1702090..1702947 (+) 858 WP_326657013.1 VOC family protein -
  VKP56_RS08485 (VKP56_08485) yaaA 1702989..1703720 (+) 732 WP_111718025.1 peroxide stress protein YaaA -
  VKP56_RS08490 (VKP56_08490) nrdG 1703894..1704508 (-) 615 WP_115225291.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  VKP56_RS08495 (VKP56_08495) - 1704508..1705017 (-) 510 WP_002991345.1 GNAT family N-acetyltransferase -
  VKP56_RS08500 (VKP56_08500) - 1705026..1705961 (-) 936 WP_115225292.1 Gfo/Idh/MocA family protein -
  VKP56_RS08505 (VKP56_08505) - 1705990..1706136 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=925016 VKP56_RS08470 WP_002982243.1 1700581..1701294(+) (treR) [Streptococcus pyogenes strain SS1445]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=925016 VKP56_RS08470 WP_002982243.1 1700581..1701294(+) (treR) [Streptococcus pyogenes strain SS1445]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679