Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   VKP56_RS07000 Genome accession   NZ_CP142350
Coordinates   1383849..1384574 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain SS1445     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1378849..1389574
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP56_RS06965 (VKP56_06965) rnpM 1378883..1379179 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  VKP56_RS06970 (VKP56_06970) nusA 1379195..1380352 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  VKP56_RS06975 (VKP56_06975) rimP 1380527..1381063 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  VKP56_RS06985 (VKP56_06985) trmB 1381322..1381957 (-) 636 WP_326656821.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  VKP56_RS06990 (VKP56_06990) ccrZ 1381957..1382748 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  VKP56_RS06995 (VKP56_06995) - 1382812..1383846 (-) 1035 WP_136290717.1 ABC transporter permease -
  VKP56_RS07000 (VKP56_07000) pptA 1383849..1384574 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  VKP56_RS07005 (VKP56_07005) - 1384646..1385065 (+) 420 WP_002983376.1 HIT family protein -
  VKP56_RS07010 (VKP56_07010) - 1385062..1385418 (+) 357 WP_030126323.1 hypothetical protein -
  VKP56_RS07015 (VKP56_07015) brpA 1385529..1386812 (-) 1284 WP_030126322.1 biofilm formation/cell division transcriptional regulator BrpA -
  VKP56_RS07020 (VKP56_07020) - 1386821..1387345 (-) 525 WP_136290716.1 GNAT family N-acetyltransferase -
  VKP56_RS07025 (VKP56_07025) tsaE 1387320..1387781 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  VKP56_RS07030 (VKP56_07030) - 1387935..1389395 (-) 1461 WP_012560892.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=925010 VKP56_RS07000 WP_002983379.1 1383849..1384574(-) (pptA) [Streptococcus pyogenes strain SS1445]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=925010 VKP56_RS07000 WP_002983379.1 1383849..1384574(-) (pptA) [Streptococcus pyogenes strain SS1445]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714