Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   VKP56_RS02250 Genome accession   NZ_CP142350
Coordinates   423668..424477 (+) Length   269 a.a.
NCBI ID   WP_115354234.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain SS1445     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 418668..429477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP56_RS02230 (VKP56_02230) - 419110..420357 (+) 1248 WP_085634191.1 AMP-binding protein -
  VKP56_RS02235 (VKP56_02235) - 420413..421447 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  VKP56_RS02240 (VKP56_02240) vicR 421609..422319 (+) 711 WP_002985645.1 response regulator YycF Regulator
  VKP56_RS02245 (VKP56_02245) vicK 422312..423664 (+) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  VKP56_RS02250 (VKP56_02250) vicX 423668..424477 (+) 810 WP_115354234.1 MBL fold metallo-hydrolase Regulator
  VKP56_RS02255 (VKP56_02255) rnc 424920..425612 (+) 693 WP_002990670.1 ribonuclease III -
  VKP56_RS02260 (VKP56_02260) smc 425613..429152 (+) 3540 WP_111688333.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30068.18 Da        Isoelectric Point: 5.5314

>NTDB_id=924993 VKP56_RS02250 WP_115354234.1 423668..424477(+) (vicX) [Streptococcus pyogenes strain SS1445]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVS
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=924993 VKP56_RS02250 WP_115354234.1 423668..424477(+) (vicX) [Streptococcus pyogenes strain SS1445]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAGT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.465

100

0.755