Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   VKP35_RS02250 Genome accession   NZ_CP142349
Coordinates   430183..430908 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain 11RS100     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 425183..435908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP35_RS02220 (VKP35_02220) - 425362..426822 (+) 1461 WP_002983366.1 NCS2 family permease -
  VKP35_RS02225 (VKP35_02225) tsaE 426976..427437 (+) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  VKP35_RS02230 (VKP35_02230) - 427412..427936 (+) 525 WP_326623131.1 N-acetyltransferase -
  VKP35_RS02235 (VKP35_02235) brpA 427945..429228 (+) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  VKP35_RS02240 (VKP35_02240) - 429339..429695 (-) 357 WP_002983373.1 hypothetical protein -
  VKP35_RS02245 (VKP35_02245) - 429692..430111 (-) 420 WP_002983376.1 HIT family protein -
  VKP35_RS02250 (VKP35_02250) pptA 430183..430908 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  VKP35_RS02255 (VKP35_02255) - 430911..431945 (+) 1035 WP_002983381.1 ABC transporter permease -
  VKP35_RS02260 (VKP35_02260) ccrZ 432009..432800 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  VKP35_RS02265 (VKP35_02265) trmB 432800..433435 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  VKP35_RS02275 (VKP35_02275) rimP 433694..434230 (+) 537 WP_002983483.1 ribosome maturation factor RimP -
  VKP35_RS02280 (VKP35_02280) nusA 434405..435562 (+) 1158 WP_002983485.1 transcription termination factor NusA -
  VKP35_RS02285 (VKP35_02285) rnpM 435578..435874 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=924934 VKP35_RS02250 WP_002983379.1 430183..430908(+) (pptA) [Streptococcus pyogenes strain 11RS100]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=924934 VKP35_RS02250 WP_002983379.1 430183..430908(+) (pptA) [Streptococcus pyogenes strain 11RS100]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCTTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714