Detailed information NTG0924733

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB4O66_RS22860
• Genome accession: NZ_CP163132
• Coordinates: 4710744..4711769 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain W4 isolate China:Kunming
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4705744..4716769

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4O66_RS22840 (AB4O66_22840)	metJ	4706929..4707246 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AB4O66_RS22845 (AB4O66_22845)	yiiX	4707306..4707914 (+)	609	WP_000702307.1	YiiX family permuted papain-like enzyme	-
AB4O66_RS22850 (AB4O66_22850)	rpmE	4707975..4708187 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AB4O66_RS22855 (AB4O66_22855)	priA	4708390..4710588 (+)	2199	WP_001361702.1	primosomal protein N'	Machinery gene
AB4O66_RS22860 (AB4O66_22860)	cytR	4710744..4711769 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AB4O66_RS22865 (AB4O66_22865)	ftsN	4711861..4712820 (+)	960	WP_000068841.1	cell division protein FtsN	-
AB4O66_RS22870 (AB4O66_22870)	hslV	4712913..4713443 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AB4O66_RS22875 (AB4O66_22875)	hslU	4713453..4714784 (+)	1332	WP_001293340.1	HslU--HslV peptidase ATPase subunit	-
AB4O66_RS22880 (AB4O66_22880)	menA	4714851..4715777 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AB4O66_RS22885 (AB4O66_22885)	rraA	4715870..4716355 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=924733 AB4O66_RS22860 WP_000644904.1 4710744..4711769(+) (cytR) [Escherichia coli strain W4 isolate China:Kunming]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=924733 AB4O66_RS22860 WP_000644904.1 4710744..4711769(+) (cytR) [Escherichia coli strain W4 isolate China:Kunming]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGATTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628