Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QUE82_RS21285 Genome accession   NZ_AP028059
Coordinates   3997708..3998397 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis subsp. natto strain NARUSE     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3992708..4003397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QUE82_RS21265 (BSNN_41770) yxeA 3993637..3993984 (-) 348 WP_003227084.1 YxeA family protein -
  QUE82_RS21270 (BSNN_41780) yxdM 3993998..3995882 (-) 1885 Protein_4131 ABC transporter permease YxdM -
  QUE82_RS21275 tpeL 3995857..3996590 (-) 734 Protein_4132 ABC transporter ATP-binding protein -
  QUE82_RS21280 (BSNN_41820) yxdK 3996734..3997711 (-) 978 WP_014481410.1 two-component system sensor histidine kinase YxdK -
  QUE82_RS21285 (BSNN_41830) braR 3997708..3998397 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  QUE82_RS21290 (BSNN_41840) iolJ 3998505..3999377 (-) 873 WP_014481411.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  QUE82_RS21295 (BSNN_41850) iolI 3999398..4000234 (-) 837 WP_014481412.1 2-keto-myo-inositol isomerase -
  QUE82_RS21300 (BSNN_41860) iolH 4000320..4001189 (-) 870 WP_014481413.1 sugar phosphate isomerase/epimerase -
  QUE82_RS21305 (BSNN_41870) iolG 4001209..4002243 (-) 1035 WP_014481414.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=92428 QUE82_RS21285 WP_003243527.1 3997708..3998397(-) (braR) [Bacillus subtilis subsp. natto strain NARUSE]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=92428 QUE82_RS21285 WP_003243527.1 3997708..3998397(-) (braR) [Bacillus subtilis subsp. natto strain NARUSE]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATACCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406

Multiple sequence alignment