Detailed information NTG0924252

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB4O91_RS21780
• Genome accession: NZ_CP163029
• Coordinates: 4536855..4537880 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain W170
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4531855..4542880

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4O91_RS21760 (AB4O91_21765)	metJ	4532916..4533233 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AB4O91_RS21765 (AB4O91_21770)	yiiX	4533417..4534025 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AB4O91_RS21770 (AB4O91_21775)	rpmE	4534086..4534298 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AB4O91_RS21775 (AB4O91_21780)	priA	4534501..4536699 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
AB4O91_RS21780 (AB4O91_21785)	cytR	4536855..4537880 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AB4O91_RS21785 (AB4O91_21790)	ftsN	4537972..4538931 (+)	960	WP_000068828.1	cell division protein FtsN	-
AB4O91_RS21790 (AB4O91_21795)	hslV	4539024..4539554 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AB4O91_RS21795 (AB4O91_21800)	hslU	4539564..4540895 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AB4O91_RS21800 (AB4O91_21805)	menA	4540962..4541888 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AB4O91_RS21805 (AB4O91_21810)	rraA	4541981..4542466 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AB4O91_RS21810 (AB4O91_21815)	zapB	4542551..4542796 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=924252 AB4O91_RS21780 WP_000644904.1 4536855..4537880(+) (cytR) [Escherichia coli strain W170]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=924252 AB4O91_RS21780 WP_000644904.1 4536855..4537880(+) (cytR) [Escherichia coli strain W170]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628