Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QUE82_RS18610 Genome accession   NZ_AP028059
Coordinates   3468335..3469048 (-) Length   237 a.a.
NCBI ID   WP_014481000.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. natto strain NARUSE     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3463335..3474048
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QUE82_RS18595 (BSNN_36420) psdB 3464494..3466434 (-) 1941 WP_014480997.1 lantibiotic ABC transporter permease PsdB -
  QUE82_RS18600 (BSNN_36430) psdA 3466409..3467188 (-) 780 WP_014480998.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  QUE82_RS18605 (BSNN_36440) psdS 3467271..3468341 (-) 1071 WP_014480999.1 two-component sensor histidine kinase PsdS -
  QUE82_RS18610 (BSNN_36450) braR 3468335..3469048 (-) 714 WP_014481000.1 two-component system response regulator PsdR Regulator
  QUE82_RS18615 (BSNN_36460) - 3469195..3469403 (+) 209 Protein_3599 hypothetical protein -
  QUE82_RS18620 (BSNN_36470) yvcN 3469439..3470203 (-) 765 WP_015251150.1 arylamine N-acetyltransferase -
  QUE82_RS18625 (BSNN_36480) crh 3470204..3470461 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  QUE82_RS18630 (BSNN_36490) whiA 3470485..3471435 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  QUE82_RS18635 (BSNN_36500) mgfK 3471458..3472411 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  QUE82_RS18640 (BSNN_36510) rapZ 3472413..3473300 (-) 888 WP_003243903.1 RNase adapter RapZ -
  QUE82_RS18645 (BSNN_36520) rppI 3473325..3473801 (-) 477 WP_014481002.1 NUDIX domain-containing protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=92413 QUE82_RS18610 WP_014481000.1 3468335..3469048(-) (braR) [Bacillus subtilis subsp. natto strain NARUSE]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RIDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=92413 QUE82_RS18610 WP_014481000.1 3468335..3469048(-) (braR) [Bacillus subtilis subsp. natto strain NARUSE]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGATCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.982

94.515

0.435

Multiple sequence alignment