Detailed information NTG0092405

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OCU50_RS11495
• Genome accession: NZ_AP025514
• Coordinates: 2559756..2563145 (+)
• Length: 1129 a.a.
• NCBI ID: WP_060468553.1
• Uniprot ID: A0A109D816
• Organism: Vibrio toranzoniae strain CECT 7225
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2554756..2568145

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU50_RS11470	erpA	2555054..2555395 (-)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-
OCU50_RS11475	hemL	2555681..2556976 (+)	1296	WP_060468550.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OCU50_RS11480	-	2557118..2557243 (-)	126	WP_017056654.1	hypothetical protein	-
OCU50_RS11485	-	2557320..2558405 (+)	1086	WP_060468551.1	AI-2E family transporter	-
OCU50_RS11490	rsmC	2558517..2559539 (+)	1023	WP_060468552.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OCU50_RS11495	chiS	2559756..2563145 (+)	3390	WP_060468553.1	response regulator	Regulator
OCU50_RS11500	-	2563849..2565531 (+)	1683	WP_060468554.1	ABC transporter substrate-binding protein	-
OCU50_RS11505	-	2565701..2566687 (+)	987	WP_060468555.1	ABC transporter permease	-
OCU50_RS11510	-	2566690..2567715 (+)	1026	WP_060468556.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127311.02 Da
• Isoelectric Point: 5.4834

>NTDB_id=92405 OCU50_RS11495 WP_060468553.1 2559756..2563145(+) (chiS) [Vibrio toranzoniae strain CECT 7225]
MFRFYRKQKFKRLQNTLMLAFLVLSIIPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESNSFIGSERYRLLHKRYHNAYLELLKRSDF
DDILLVDINGNVAYSVFKRDDYGTNLLTGKYKDSNLGTTFQQLKKDVTDRRKSNEDYTPVIVSDFKDENGRQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGSDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFDNTQDQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVFVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMQLIRSQNDELEDNLKTIQKQNEELHLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGSKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLVQAGQDAG
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQEELQNYSKSGSYSHFQAPDLIDNTQQEDSVINENP
DGPLLVIADDEPVNLRVLDSFLKLEGFRVRTACDGPETIEIIEKEKPELLLLDIMMPGMSGYQVCETLRKQYDHAQLPII
MLTALNQAEDRVRGFEVGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKIEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSSRVNNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRIADKASGEGKNKQELMREVLVDAMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=92405 OCU50_RS11495 WP_060468553.1 2559756..2563145(+) (chiS) [Vibrio toranzoniae strain CECT 7225]
ATGTTTAGATTCTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAATACTCTAATGCTGGCATTTCTTGTCCTCAGTATTAT
CCCAGTGACACTAATCGCAATATTCTTCCTCCAGTCGCACAGTCAAGATCTACAGGAACAAAGCACCTCACATCTTGTTT
CGGTTCGTGATACTAAGCAACAGCAAATCGTCGATTACTTACAAGCTCAAGAGTCCCAAGTCATGGGCTTTGTACGCTCA
GAACTGGCTAATGCCAGTGGTGGGCGATTCTATGGGTTGATCAATGCATTTCAAAGGCTCGGCCTAGATATTGACGAAGC
ACGTAGCAATGCGCAGCAGCGTTATATTCAAGGATCAGGCGATCAAATCAAAACATCTATTCTTCCAGAATCGAACAGTT
TTATTGGCAGTGAGCGTTATCGCCTACTACACAAACGCTACCACAACGCTTACCTAGAACTACTGAAACGATCCGATTTT
GACGATATATTATTGGTTGATATCAACGGTAACGTCGCTTATTCCGTATTTAAACGTGATGATTATGGCACCAATTTACT
GACAGGTAAGTACAAGGATTCAAACCTAGGCACTACCTTTCAACAACTAAAAAAAGACGTAACCGACCGACGTAAATCTA
ATGAGGATTACACGCCTGTTATTGTCTCTGACTTTAAAGACGAGAATGGTAGACAAACAGCATGGTTAGGTGCGCCTATC
GTACAGCAGGGCTATCTGCACAGCTATGCGATGTTTAGATTACCGATCAACGGCATAACGAAACTTATCGCGGATCTCAA
CAAGAGTTCCAACATTCAAACCTTATTGGTAGGTAGTGATCACTTACCTCGTAGCCTTGCGCATTCGCAAGAATCGATCA
ACTTAAGCCTAGACGTTGTTGATAAAGCGCTTGCGGGCGAAACTGCAGTGGGCACCTTCGATAACACTCAAGATCAAGCG
ATCATCGCTGCCTATACGCCAATTGAACTCAAATATGCAACTTGGGCTCTCGTTGTCGAGCTGCCAGAGAAAGAAGCATT
TGCCCGAATTCACCAGCTAGAAAAGATCTTCGTGATCGTAATGTTAACTGCAATCATTCTAGTATTTGTTGCATCGCATT
ACCTATCCAACTTCATCACATCGCCGCTCCTCAAACTCACTTGGGCAGCCGAGAAAGTATCTGCTGGTGATCTTGATGAA
ACGATGATCAATACCGAGCGAAAAGATGAGATAGGCCGCCTTGCAGTAAGCTTCGAACGAATGCAGCGCTCAATTCGCGA
AAAGATGCAGCTGATAAGAAGCCAGAATGATGAACTTGAGGACAACCTCAAGACCATTCAAAAGCAAAACGAAGAGTTGC
ACCTTGCTAACAAACTAAAAGATGAGTTCTTAGCAACAACTTCGCACGAACTTAGAACACCACTGCATGGGATGGTTGGT
ATTGCTGAAGCACTAATATCTGGTGCGAACGGCCCCATTCCAGCTAACCAGAAGTACCAGTTAGATATCATCATCAATAG
TGGTCAGCGATTAGCAACCTTGGTTGATGATCTACTTGATTACCACAAGATGCGTTACGGCAGCTTGGATATTAAGAAAT
CTGCGGTTGATCTGTCTGCAGCCACCAGCTTGGTGCTTGAGCTGTCCCATCACCTGCTGGGTAGTAAACCAATCCGCATT
ATTAACCAAGTTCCTAGTGATTTGGGACTAGTTTCATCTGACCCTCAACGCCTTGAACAAGTGATGTATAACTTGGTCGG
TAATGCCATCAAGTACACATCAGAAGGTAAGATTGTCATCTCTGCGAGCGTTATTGACGACAACATTCGCGTGCAAGTTG
TTGATACCGGACAAGGTATACCCGCTGAGTATCTAGAGCACATCTTTGAACCCTTAGTTCAAGCAGGTCAAGATGCAGGC
AACTATCGTCAAGGTGCAGGGCTTGGGTTATCCATTAGCCGTCAACTGATTGAGCTTATGGGCGGGTCACTTTACGTAAG
TAGTCAGCCGATGCTTGGCACTACCTTCAGCTTTACGCTACCTTTAGCTACACAAGAAGAATTGCAGAACTACAGCAAGT
CTGGCAGCTACTCACACTTCCAAGCTCCAGATTTAATTGATAATACTCAACAAGAAGACAGCGTTATCAATGAAAATCCT
GACGGCCCACTCTTAGTAATCGCAGATGATGAGCCAGTAAACCTACGCGTATTAGACAGTTTCTTGAAGTTAGAAGGTTT
TCGAGTTCGTACTGCATGTGACGGTCCAGAAACCATTGAAATAATTGAAAAAGAGAAGCCTGAATTACTTCTACTCGACA
TCATGATGCCTGGTATGAGTGGCTACCAGGTTTGCGAAACACTGCGTAAACAATATGACCATGCACAGTTACCAATCATC
ATGCTTACGGCGCTTAACCAAGCAGAGGATCGAGTACGAGGCTTCGAAGTCGGAGCCAATGACTACTTATCCAAGCCGTT
CAACAAACAAGAGTTAGCCGCTCGAATTACTGCGCACCTATCAGCAAGCAAAGCTGAGCAAAGACGACTTGAAAATGACC
AACTACAACTAGAGCTTAAACATAGAGCCATGGTTGAAGCTAATTTACTAGAGACACAAGGACGTTTACTAGAACAATTA
GAATCCGCTCCGGAAGCCATCATCTGTATTCGAGACGACCAGCGCATTCGATTTGCAAATGAAGCAGCAGCCAAACTCTT
TAGGCGTGGGCAAGAGCAACTTAAGCGTTCAATGGCTGACGAAATCATTGCGCCTAAGTACCTCAAAATAGAACAAGCCC
ACTACTGCGGTGATATTGATATCTACATAGACGACACACGTCAGCGCATTCCAAGTGATATCCTTAAGCTACCTGAAGGC
TCAGGGCTCGACACCATGTATATCTTCAATGTGGGTGGTGGCGTTAACTCAAGCCGAGTCAATAACCTTGAAACGGCGGT
TGAGGCACTTTCAAGCTACGCCTTTGAAGGTGACAAAGATAAGCTCCAACAGCTGAAAGAGCTCGGAGGTGAGTTTACTC
GTATCGCAGATAAAGCGAGCGGTGAAGGTAAAAACAAACAGGAATTAATGCGTGAAGTATTGGTTGATGCCATGACCAAT
GCCATCATTTACTGGGAATCAGTAACAGGTGAAACTAAGTTTGCCTTCGCAGAGAAGAGTGGCTTGTGGCGCGTCTATTT
AGACCGCAGCACGCTGCAAACACGAACGTTAGACAAATACCTACGCGTAGAAACACTCCCTAAAACACCTCGTTGGCGAA
CCGTATTGAGCTCGATCGAGTTTATACTCGAACACTGTAAAGAACAGACACCAGAACGAACTCATATAGAGATGCTCAGA
GATAAGTTACAGAAACTACTGACTAGCTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• PAS domain (PAS_8) (880-914)

• HAMP domain (HAMP) (375-427)

3D structure

• AlphaFold DB: A0A109D816

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	75.908	100	0.759