Detailed information NTG0923863

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AB3470_RS11825
• Genome accession: NZ_CP162517
• Coordinates: 2260897..2262033 (+)
• Length: 378 a.a.
• NCBI ID: WP_068947494.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain BF12B1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2255897..2267033

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3470_RS11805 (AB3470_11805)	-	2256473..2258707 (+)	2235	WP_068947496.1	tail fiber domain-containing protein	-
AB3470_RS11810 (AB3470_11810)	blyA	2258885..2259988 (+)	1104	WP_068947495.1	N-acetylmuramoyl-L-alanine amidase BlyA	-
AB3470_RS11815 (AB3470_11815)	-	2260105..2260497 (+)	393	WP_017696898.1	hypothetical protein	-
AB3470_RS11820 (AB3470_11820)	-	2260518..2260769 (+)	252	WP_017696899.1	phage holin	-
AB3470_RS11825 (AB3470_11825)	rapC	2260897..2262033 (+)	1137	WP_068947494.1	Rap family tetratricopeptide repeat protein	Regulator
AB3470_RS11830 (AB3470_11830)	-	2262023..2262199 (+)	177	WP_068947493.1	aspartate phosphatase	-
AB3470_RS11835 (AB3470_11835)	-	2262240..2263490 (-)	1251	WP_072692677.1	DNA polymerase thumb domain-containing protein	-
AB3470_RS11840 (AB3470_11840)	yolD	2263483..2263815 (-)	333	WP_041336419.1	YolD-like family protein	-
AB3470_RS11845 (AB3470_11845)	-	2263983..2264981 (+)	999	WP_068947491.1	hypothetical protein	-
AB3470_RS11850 (AB3470_11850)	-	2265137..2265226 (+)	90	WP_072692678.1	putative holin-like toxin	-
AB3470_RS11855 (AB3470_11855)	-	2265529..2265987 (-)	459	WP_071581355.1	YrhA family protein	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44847.08 Da
• Isoelectric Point: 5.0660

>NTDB_id=923863 AB3470_RS11825 WP_068947494.1 2260897..2262033(+) (rapC) [Bacillus subtilis strain BF12B1]
MEQMISSSKVGVKINEWYKYIRLFSVPDSEILKAEVEEEIRHMKEDQDLLLYYSLMCFRHQLMLDYLEPKTLNEERPKIS
DLLEKIESSQTDLKGILEYYFNFFRGMYEFEQYEYLNAISFYKQAERKLSLVADEIERAEFHYKVAEIYYHMKQTHMSMH
HIVQAIDSYKAHENYTVRVIQCSFVIGLNYLDMDYPEKAIPHFKDALDKAREIDMSRLIGSSLYNLGLCSFAEEAYEKAS
EYFKEGIRVYQDNGYEHSNRILDILLMLTKTTFKMRNHSEGISWCAHGLSLSKNLNDEIMAKMFEFIHALYVDNDNEKLN
SILNYLELKSMLSDVEDLASDAAKYYNEKEDHKVAVAYYEKVLYARKQIQRGDCLYET

Nucleotide

• Length: 1137 bp

>NTDB_id=923863 AB3470_RS11825 WP_068947494.1 2260897..2262033(+) (rapC) [Bacillus subtilis strain BF12B1]
TTGGAGCAGATGATCTCTTCTTCTAAAGTTGGAGTGAAAATAAATGAGTGGTATAAATACATAAGATTATTTAGTGTCCC
AGATTCGGAAATATTGAAAGCTGAGGTCGAGGAAGAAATAAGGCATATGAAAGAAGATCAAGATTTATTGCTGTACTATT
CTCTCATGTGTTTTCGCCATCAGCTGATGCTGGACTACCTTGAACCAAAAACATTGAACGAAGAACGACCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGTAGTCAAACTGATTTGAAAGGGATTCTTGAATATTATTTTAACTTTTTCCGGGGAAT
GTATGAATTTGAACAATACGAATATCTTAATGCCATAAGCTTCTATAAGCAAGCCGAGAGAAAATTATCACTTGTTGCAG
ATGAAATTGAAAGAGCTGAATTCCACTATAAAGTTGCAGAAATTTATTATCATATGAAGCAAACACATATGTCGATGCAC
CACATTGTTCAAGCAATCGATAGTTATAAAGCACATGAAAACTACACTGTAAGAGTTATTCAATGCTCATTTGTTATCGG
ACTGAACTATTTGGATATGGACTACCCTGAAAAAGCGATCCCTCATTTTAAAGATGCTCTAGATAAAGCAAGAGAAATCG
ATATGTCACGATTAATCGGATCATCTCTTTACAATCTCGGCTTATGTTCCTTTGCTGAGGAAGCTTATGAAAAGGCATCT
GAGTACTTCAAGGAGGGCATTAGAGTATATCAGGATAATGGGTATGAACATTCAAATCGCATATTAGATATCTTACTTAT
GTTGACAAAAACCACTTTTAAAATGAGAAATCACTCCGAGGGAATTTCTTGGTGTGCACACGGTCTGTCTTTGTCCAAAA
ATTTAAACGATGAGATTATGGCAAAAATGTTTGAATTCATTCATGCCTTATATGTAGATAATGACAATGAAAAATTAAAT
TCAATTCTAAATTATTTAGAATTAAAGTCAATGCTTTCAGACGTGGAGGATTTAGCATCAGATGCAGCGAAGTATTACAA
TGAAAAAGAAGACCATAAAGTGGCTGTTGCTTATTATGAAAAAGTGCTTTATGCCCGTAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAACTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_8) (343-367)

• Tetratricopeptide repeat (TPR_8) (222-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	48.031	100	0.484
rapF	Bacillus subtilis subsp. subtilis str. 168	45.789	100	0.46