Detailed information NTG0092385

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: QUE82_RS13395
• Genome accession: NZ_AP028059
• Coordinates: 2490789..2491916 (-)
• Length: 375 a.a.
• NCBI ID: WP_014480328.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. natto strain NARUSE
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2485789..2496916

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUE82_RS13370	-	2485836..2486048 (-)	213	Protein_2582	recombinase family protein	-
QUE82_RS13375 (BSNN_26250)	fumC	2486267..2487655 (-)	1389	WP_014480325.1	class II fumarate hydratase	-
QUE82_RS13380 (BSNN_26260)	-	2487822..2488712 (+)	891	WP_014480326.1	LysR family transcriptional regulator	-
QUE82_RS13385 (BSNN_26270)	-	2489654..2490049 (+)	396	WP_014480327.1	VOC family protein	-
QUE82_RS13395 (BSNN_26280)	rapC	2490789..2491916 (-)	1128	WP_014480328.1	Rap family tetratricopeptide repeat protein	Regulator
QUE82_RS13400	-	2492098..2494024 (+)	1927	Protein_2587	T7SS effector LXG polymorphic toxin	-
QUE82_RS13405 (BSNN_26310)	-	2494038..2494325 (+)	288	WP_014480331.1	hypothetical protein	-
QUE82_RS13410 (BSNN_26320)	-	2494728..2495168 (+)	441	WP_014480332.1	SMI1/KNR4 family protein	-
QUE82_RS13415 (BSNN_26330)	-	2495267..2495719 (+)	453	WP_014480333.1	SMI1/KNR4 family protein	-
QUE82_RS13420 (BSNN_26340)	cdiI	2495816..2496175 (+)	360	WP_014480334.1	ribonuclease toxin immunity protein CdiI	-
QUE82_RS13425 (BSNN_26350)	-	2496280..2496759 (+)	480	WP_224588637.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44149.36 Da
• Isoelectric Point: 6.0289

>NTDB_id=92385 QUE82_RS13395 WP_014480328.1 2490789..2491916(-) (rapC) [Bacillus subtilis subsp. natto strain NARUSE]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALKLSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLNALYVDAVDQQGVNKTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF

Nucleotide

• Length: 1128 bp

>NTDB_id=92385 QUE82_RS13395 WP_014480328.1 2490789..2491916(-) (rapC) [Bacillus subtilis subsp. natto strain NARUSE]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTCGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCTTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACGACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTATCGTATTATTCTCTGTTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCTGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCGTTGGATATTTATAATCAATATGAACTTTATAAGGTGCGAAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAAAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGTGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAATGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATAAAACCATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-251)

• Tetratricopeptide repeat (TPR_8) (259-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.415	100	0.445
rapF	Bacillus subtilis subsp. subtilis str. 168	39.418	100	0.397