Detailed information NTG0923791

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: AB3470_RS01660
• Genome accession: NZ_CP162517
• Coordinates: 302514..303635 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain BF12B1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 297514..308635

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3470_RS01635 (AB3470_01635)	ycdA	297519..298583 (-)	1065	WP_396283554.1	DUF4352 domain-containing protein	-
AB3470_RS01640 (AB3470_01640)	-	298606..298737 (-)	132	WP_003246334.1	hypothetical protein	-
AB3470_RS01645 (AB3470_01645)	ycdB	298911..300332 (+)	1422	WP_029726975.1	YcdB/YcdC domain-containing protein	-
AB3470_RS01650 (AB3470_01650)	ycdC	300519..301880 (+)	1362	WP_029726976.1	YcdB/YcdC domain-containing protein	-
AB3470_RS01655 (AB3470_01655)	cwlK	301888..302391 (-)	504	WP_017695036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
AB3470_RS01660 (AB3470_01660)	rapF	302514..303635 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
AB3470_RS01665 (AB3470_01665)	ycdF	303742..304518 (+)	777	WP_029726977.1	SDR family oxidoreductase	-
AB3470_RS01670 (AB3470_01670)	ycdG	304543..306228 (+)	1686	WP_113713019.1	alpha-glucosidase	-
AB3470_RS01675 (AB3470_01675)	znuA	306416..307375 (+)	960	WP_029317219.1	metal ABC transporter substrate-binding protein	-
AB3470_RS01680 (AB3470_01680)	znuC	307430..308125 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=923791 AB3470_RS01660 WP_015715201.1 302514..303635(+) (rapF) [Bacillus subtilis strain BF12B1]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=923791 AB3470_RS01660 WP_015715201.1 302514..303635(+) (rapF) [Bacillus subtilis strain BF12B1]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCTTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGTT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405