Detailed information    

insolico Bioinformatically predicted

Overview


Name   rok   Type   Regulator
Locus tag   QUE82_RS08045 Genome accession   NZ_AP028059
Coordinates   1525022..1525597 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   O34857
Organism   Bacillus subtilis subsp. natto strain NARUSE     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1520022..1530597
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QUE82_RS08015 (BSNN_15370) dapD 1520210..1520920 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  QUE82_RS08020 (BSNN_15380) dapI 1520990..1522114 (+) 1125 WP_014476668.1 N-acetyldiaminopimelate deacetylase -
  QUE82_RS08025 (BSNN_15390) ykuS 1522176..1522421 (+) 246 WP_003232382.1 YkuS family protein -
  QUE82_RS08030 (BSNN_15400) mscT 1522458..1523261 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  QUE82_RS08035 (BSNN_15410) ahpA 1523498..1524040 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  QUE82_RS08040 (BSNN_15420) ykuV 1524110..1524556 (+) 447 WP_014479665.1 thiol-disulfide oxidoreductase YkuV -
  QUE82_RS08045 (BSNN_15430) rok 1525022..1525597 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  QUE82_RS08055 (BSNN_15460) cse15 1526928..1527893 (-) 966 WP_014479669.1 spore protein Cse15 -
  QUE82_RS08060 (BSNN_15470) mobA 1528030..1528629 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  QUE82_RS08065 (BSNN_15480) moeB 1528680..1529699 (+) 1020 WP_014479671.1 molybdopterin-synthase adenylyltransferase MoeB -

Sequence


Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=92343 QUE82_RS08045 WP_003232378.1 1525022..1525597(+) (rok) [Bacillus subtilis subsp. natto strain NARUSE]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=92343 QUE82_RS08045 WP_003232378.1 1525022..1525597(+) (rok) [Bacillus subtilis subsp. natto strain NARUSE]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  PDB 5ZUX
  PDB 5ZUZ

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment