Detailed information NTG0923295

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: AB3431_RS09835
• Genome accession: NZ_CP162467
• Coordinates: 1946143..1947225 (+)
• Length: 360 a.a.
• NCBI ID: WP_001548033.1
• Uniprot ID: A0A0H2XJ41
• Organism: Staphylococcus aureus strain TUM20823
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1941143..1952225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3431_RS09815 (AB3431_09815)	-	1941515..1942585 (-)	1071	WP_000460983.1	GGDEF domain-containing protein	-
AB3431_RS09820 (AB3431_09820)	-	1942903..1943958 (+)	1056	WP_000258151.1	glycosyltransferase family 4 protein	-
AB3431_RS09825 (AB3431_09825)	-	1944128..1944769 (-)	642	WP_000192947.1	YigZ family protein	-
AB3431_RS09830 (AB3431_09830)	fakB1	1944913..1945779 (+)	867	WP_000686342.1	fatty acid kinase binding subunit FakB1	-
AB3431_RS09835 (AB3431_09835)	comFA	1946143..1947225 (+)	1083	WP_001548033.1	DEAD/DEAH box helicase	Machinery gene
AB3431_RS09840 (AB3431_09840)	-	1947218..1947892 (+)	675	WP_001057965.1	ComF family protein	-
AB3431_RS09845 (AB3431_09845)	raiA	1947953..1948525 (+)	573	WP_000617735.1	ribosome-associated translation inhibitor RaiA	-
AB3431_RS09850 (AB3431_09850)	secA	1948939..1951470 (+)	2532	WP_000506531.1	preprotein translocase subunit SecA	-
AB3431_RS09855 (AB3431_09855)	-	1951512..1951616 (+)	105	WP_001790092.1	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42111.65 Da
• Isoelectric Point: 9.8307

>NTDB_id=923295 AB3431_RS09835 WP_001548033.1 1946143..1947225(+) (comFA) [Staphylococcus aureus strain TUM20823]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRKRQTILLYAVTGAGKTEMMFQGIQYARIQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSRQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKNLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNKKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=923295 AB3431_RS09835 WP_001548033.1 1946143..1947225(+) (comFA) [Staphylococcus aureus strain TUM20823]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAAAGAGACAAACGATTTTGTTATATGCCGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGAATACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGACAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAATTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACAATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGTTATTTCAAACTTAATAATAAGAAGATTCAGA
AAATGTTATACCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATACGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGGGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAG
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

3D structure

• AlphaFold DB: A0A0H2XJ41

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367