Detailed information NTG0092312

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OCU90_RS14250
• Genome accession: NZ_AP025508
• Coordinates: 3218513..3221902 (+)
• Length: 1129 a.a.
• NCBI ID: WP_004734534.1
• Uniprot ID: A0A0P6YSG7
• Organism: Vibrio splendidus strain LMG 19031
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 3213513..3226902

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU90_RS14230	erpA	3213801..3214142 (-)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-
OCU90_RS14235	hemL	3214439..3215734 (+)	1296	WP_061022488.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OCU90_RS14240	-	3216078..3217163 (+)	1086	WP_054541852.1	AI-2E family transporter	-
OCU90_RS14245	rsmC	3217274..3218296 (+)	1023	WP_061022489.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OCU90_RS14250	chiS	3218513..3221902 (+)	3390	WP_004734534.1	response regulator	Regulator
OCU90_RS14255	-	3222699..3224381 (+)	1683	WP_004734533.1	ABC transporter substrate-binding protein	-
OCU90_RS14260	-	3224551..3225537 (+)	987	WP_004734532.1	ABC transporter permease	-
OCU90_RS14265	-	3225540..3226565 (+)	1026	WP_004734531.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127177.82 Da
• Isoelectric Point: 5.4266

>NTDB_id=92312 OCU90_RS14250 WP_004734534.1 3218513..3221902(+) (chiS) [Vibrio splendidus strain LMG 19031]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESSSFIGSERYRLLHKRYHNSYQELLKRSDF
DDILLVDINGNVAYSIFKRDDYGTNLLTGKYKDSNLGVTFQRLAKDVKDKRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGDDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFNNTQDQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVFVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMQLIKSQNGELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLIQAGQDAS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQEELDSYSESGSYSHFQAPDLIDNTQQENSAISENP
DGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCEALRKQYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKVEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRVNNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKATGEGKNKQELMREVLVDVMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=92312 OCU90_RS14250 WP_004734534.1 3218513..3221902(+) (chiS) [Vibrio splendidus strain LMG 19031]
ATGTTTAGATTCTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAATACCCTAATGCTGGCATTTCTTGTCCTCAGTATTAC
CCCAGTGACACTTATCGCGATATTTTTCCTCCAGTCGCACAGTCAGGATCTTCAGGAACAAAGTACTTCGCACCTTGTTT
CGGTCCGTGATACTAAGCAACAGCAAATTGTCGATTATCTACAAGCTCAAGAGTCCCAAGTCATGGGCTTTGTTCGCTCA
GAACTTGCCAATGCCAGTGGCGGGCGATTCTATGGTTTAATCAATGCGTTCCAACGCTTAGGGTTAGATATTGACGAAGC
GCGCAGTAATGCGCAGCAGCGTTACATTCAAGGCTCTGGCGATCAAATCAAGACATCGATTCTTCCAGAATCTAGTAGCT
TTATTGGCAGCGAACGTTATCGACTGCTTCACAAGCGCTACCATAACTCATACCAAGAATTGCTTAAGCGTTCAGACTTT
GATGACATTCTATTAGTCGATATTAACGGTAACGTCGCTTACTCAATCTTTAAGCGTGATGATTACGGCACTAACTTGCT
AACAGGTAAGTACAAAGATTCAAACCTAGGCGTTACCTTTCAACGCTTAGCAAAAGACGTAAAAGACAAACGTAAATCCA
ACGAGGACTATACACCGGTTATCGTTTCTGACTTTAAAGATGAGAACGGTAAGCAGACGGCTTGGTTAGGTGCGCCTATT
GTTCAACAAGGCTACCTGCACAGTTACGCCATGTTTAGGCTGCCAATCAATGGGATTACTAAGCTGATTGCGGATCTCAA
CAAGAGTTCAAATATTCAAACACTGCTTGTGGGTGATGATCACCTGCCACGCAGCCTCGCCCATTCGCAAGAGTCGATTA
ATTTAAGCTTAGACGTTGTCGATAAAGCATTGGCTGGCGAAACGGCCGTAGGTACGTTCAACAACACTCAAGATCAAGCA
ATCATCGCAGCATATACCCCAATTGAGCTGAAATACGCAACATGGGCTCTTGTCGTAGAGCTGCCAGAAAAAGAGGCGTT
TGCCCGTATTCATCAGTTAGAAAAGATCTTCGTGATCGTGATGCTCACAGCGATCATTCTTGTGTTTGTTGCATCGCATT
ATCTGTCCAATTTCATCACTTCTCCTCTCCTCAAGCTCACATGGGCTGCCGAGAAAGTCTCTGCAGGTGATCTTGATGAA
ACCATGATCAACACCGAACGCAAAGATGAAATAGGCCGACTCGCGGTTAGCTTCGAAAGAATGCAGCGATCGATCCGTGA
AAAAATGCAGCTCATCAAGAGCCAAAACGGTGAGCTTGAGGACAACCTTAAGACCATTCAAAAGCAAAACGAAGAGTTGC
AACTGGCGAACAAACTTAAAGATGAATTCTTAGCCACCACCTCACATGAATTGAGAACACCATTACATGGCATGGTTGGC
ATCGCTGAAGCGCTAATATCTGGTGCTAACGGCCCTATTCCTGCCAACCAGAAGTACCAATTGGATATCATCATCAATAG
TGGCCAGAGGTTGGCGACACTGGTTGATGACCTGCTTGATTATCACAAGATGCGCTATGGCAGCTTGGATATTAAGAAGT
CTGCTGTTGATTTATCTGCAGCCACCAGCTTAGTGCTTGAGTTATCTCATCACCTGTTAGGTAACAAGCCAATCCGCATC
ATTAACCAAGTGCCAAGTGATTTAGGTCTCGTTTCATCGGATCCTCAACGACTTGAGCAAGTGATGTATAACTTGGTTGG
CAATGCTATCAAGTACACATCAGAAGGTAAGATTGTTATCTCAGCAAGCGTCATCGACGACAACATTCGAGTACAAGTTG
TTGATACCGGCCAAGGTATACCTGCTGAATATCTTGAACACATCTTTGAGCCATTGATTCAAGCTGGCCAAGACGCAAGT
AACTATCGCCAAGGTGCCGGCCTTGGGTTATCCATCAGTCGTCAGTTAATTGAGTTGATGGGTGGTTCACTGTACGTAAG
TAGCCAACCGATGCTTGGCACTACATTCAGCTTCACATTACCTTTAGCTACCCAAGAAGAACTGGATAGCTACAGTGAGT
CAGGGAGCTACTCACACTTCCAAGCGCCGGATTTAATTGATAACACTCAGCAAGAAAACAGCGCTATCAGTGAAAACCCA
GATGGCCCGTTATTGGTTATCGCCGATGATGAGCCGGTGAACCTGCGCGTATTAGACAGCTTCTTGAAGCTAGAAGGTTA
TCGAGTTCGCACCGCCTGTGACGGCCCTGAGACCATTGAACTGATTGAAAAAGAGAAACCAGAGTTACTTCTGCTCGACA
TCATGATGCCAGGTATGAGCGGCTATCAGGTTTGTGAAGCACTGCGTAAGCAATACGATCATGCACAATTGCCAATCATC
ATGCTAACGGCACTCAACCAAGCGGAAGACCGTGTTCGCGGTTTCGAAGCGGGTGCCAACGATTACTTGTCTAAACCGTT
CAACAAACAAGAACTGGCGGCGCGAATTACGGCTCACTTATCAGCAAGCAAAGCTGAGCAAAGGCGTCTTGAGAATGATC
AATTGCAACTAGAGCTTAAACACAGGGCCATGGTTGAAGCTAACCTACTAGAAACTCAAGGGCGCTTGTTGGAGCAGTTG
GAGTCAGCCCCTGAAGCCATCATCTGTATTCGTGATGACCAACGTATTCGCTTTGCCAACGAAGCGGCTGCTAAGCTGTT
TAGACGTGGGCAAGAACAACTCAAGCGCTCAATGGCCGACGAGATCATCGCGCCTAAATACCTGAAGGTGGAACAAGCTC
ACTACTGTGGTGATATTGATATCTATATAGACGACACACGTCAGCGCATTCCAAGTGACATCCTTAAGCTACCTGAAGGT
TCAGGGCTCGACACCATGTATATCTTCAATGTCGGTGGTGGCGTTAACTCAAACCGAGTCAATAACCTTGAAACAGCGGT
TGAGGCACTTTCAAGCTACGCCTTTGAAGGTGACAAAGATAAGCTTCAACAACTGAAAGAGCTTGGCGGTGAATTTACTC
GCCTTGCTGATAAGGCAACCGGTGAGGGTAAAAACAAGCAAGAGCTGATGCGTGAAGTACTAGTCGATGTCATGACCAAT
GCCATTATCTACTGGGAGTCTGTTACTGGGGAGACCAAGTTTGCTTTCGCAGAAAAGAGTGGCTTATGGCGAGTCTACTT
AGACCGCAGTACCCTACAAACTAGAACGCTAGACAAATACCTACGCGTAGAAACTCTACCGAAAACACCTCGCTGGCGAA
CGGTACTGAGCTCTATCGAATTCATACTTGAACACTGTAAAGAACAAACACCAGAAAGAACTCATATCGAGATGCTAAGG
GATAAACTACAGAAACTACTGACCAGCTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

• PAS domain (PAS_8) (880-914)

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

3D structure

• AlphaFold DB: A0A0P6YSG7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.351	100	0.764