Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   AB3447_RS09820 Genome accession   NZ_CP162456
Coordinates   1977946..1978746 (-) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain TUM20915     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1972946..1983746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3447_RS09805 (AB3447_09805) - 1972975..1974231 (-) 1257 WP_368410558.1 DUF3578 domain-containing protein -
  AB3447_RS09810 (AB3447_09810) rlmH 1974553..1975032 (-) 480 WP_000704777.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  AB3447_RS09815 (AB3447_09815) adsA 1975400..1977718 (-) 2319 WP_000645781.1 LPXTG-anchored adenosine synthase AdsA -
  AB3447_RS09820 (AB3447_09820) vicX 1977946..1978746 (-) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  AB3447_RS09825 (AB3447_09825) - 1979135..1979923 (-) 789 WP_001104167.1 two-component system regulatory protein YycI -
  AB3447_RS09830 (AB3447_09830) yycH 1979924..1981258 (-) 1335 WP_001060150.1 two-component system activity regulator YycH -
  AB3447_RS09835 (AB3447_09835) walK 1981251..1983077 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=922882 AB3447_RS09820 WP_000088649.1 1977946..1978746(-) (vicX) [Staphylococcus aureus strain TUM20915]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=922882 AB3447_RS09820 WP_000088649.1 1977946..1978746(-) (vicX) [Staphylococcus aureus strain TUM20915]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGACCATATTAAAGGTTTAGGTGTTTTAGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAAGCTATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGATATGTGTCGGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGACATGTATCTAATGAGGATGCGGGCCATGCGATGACGGATGTGATTACAGGCAACACGA
AACGTATTTACCTATCACATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474