Detailed information NTG0921994

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: AB3443_RS07085
• Genome accession: NZ_CP162437
• Coordinates: 1391097..1392179 (-)
• Length: 360 a.a.
• NCBI ID: WP_001548033.1
• Uniprot ID: A0A0H2XJ41
• Organism: Staphylococcus aureus strain TUM22698
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1386097..1397179

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3443_RS07065 (AB3443_07065)	-	1386706..1386810 (-)	105	WP_001790092.1	hypothetical protein	-
AB3443_RS07070 (AB3443_07070)	secA	1386852..1389383 (-)	2532	WP_000506531.1	preprotein translocase subunit SecA	-
AB3443_RS07075 (AB3443_07075)	raiA	1389797..1390369 (-)	573	WP_000617735.1	ribosome-associated translation inhibitor RaiA	-
AB3443_RS07080 (AB3443_07080)	-	1390430..1391104 (-)	675	WP_001057965.1	ComF family protein	-
AB3443_RS07085 (AB3443_07085)	comFA	1391097..1392179 (-)	1083	WP_001548033.1	DEAD/DEAH box helicase	Machinery gene
AB3443_RS07090 (AB3443_07090)	fakB1	1392543..1393409 (-)	867	WP_000686342.1	fatty acid kinase binding subunit FakB1	-
AB3443_RS07095 (AB3443_07095)	-	1393553..1394194 (+)	642	WP_000192947.1	YigZ family protein	-
AB3443_RS07100 (AB3443_07100)	-	1394364..1395419 (-)	1056	WP_000258151.1	glycosyltransferase family 4 protein	-
AB3443_RS07105 (AB3443_07105)	-	1395544..1396716 (-)	1173	WP_000195429.1	IS256-like element IS256 family transposase	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42111.65 Da
• Isoelectric Point: 9.8307

>NTDB_id=921994 AB3443_RS07085 WP_001548033.1 1391097..1392179(-) (comFA) [Staphylococcus aureus strain TUM22698]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRKRQTILLYAVTGAGKTEMMFQGIQYARIQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSRQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKNLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNKKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=921994 AB3443_RS07085 WP_001548033.1 1391097..1392179(-) (comFA) [Staphylococcus aureus strain TUM22698]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAAAGAGACAAACGATTTTGTTATATGCCGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGAATACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGACAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAATTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACAATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGTTATTTCAAACTTAATAATAAGAAGATTCAGA
AAATGTTATACCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATACGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGGGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAG
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

3D structure

• AlphaFold DB: A0A0H2XJ41

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367