Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   AB3426_RS09735 Genome accession   NZ_CP162433
Coordinates   1984123..1984923 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain TUM22701     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1979123..1989923
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3426_RS09720 (AB3426_09720) walK 1979792..1981618 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  AB3426_RS09725 (AB3426_09725) yycH 1981611..1982945 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  AB3426_RS09730 (AB3426_09730) - 1982946..1983734 (+) 789 WP_001104165.1 two-component system regulatory protein YycI -
  AB3426_RS09735 (AB3426_09735) vicX 1984123..1984923 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  AB3426_RS09740 (AB3426_09740) adsA 1985150..1987468 (+) 2319 WP_341262117.1 LPXTG-anchored adenosine synthase AdsA -
  AB3426_RS09745 (AB3426_09745) rlmH 1987836..1988315 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  AB3426_RS09750 (AB3426_09750) - 1988416..1988559 (+) 144 WP_001631028.1 restriction endonuclease subunit R -
  AB3426_RS09755 (AB3426_09755) - 1988552..1989754 (+) 1203 WP_001631029.1 restriction endonuclease subunit S -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=921827 AB3426_RS09735 WP_000088649.1 1984123..1984923(+) (vicX) [Staphylococcus aureus strain TUM22701]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=921827 AB3426_RS09735 WP_000088649.1 1984123..1984923(+) (vicX) [Staphylococcus aureus strain TUM22701]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGATGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474