Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxP   Type   Regulator
Locus tag   OCV24_RS14370 Genome accession   NZ_AP025498
Coordinates   8101..9186 (-) Length   361 a.a.
NCBI ID   WP_017058675.1    Uniprot ID   A0A2N7JG46
Organism   Vibrio kanaloae strain LMG 20539     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context

Location: 3101..14186
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OCV24_RS14350 - 3783..4091 (+) 309 WP_136980386.1 DUF1289 domain-containing protein -
  OCV24_RS14355 - 4179..4529 (-) 351 WP_150878892.1 HopJ type III effector protein -
  OCV24_RS14360 - 4726..5385 (+) 660 WP_017058673.1 PilZ domain-containing protein -
  OCV24_RS14365 luxQ 5531..8101 (-) 2571 WP_150878891.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ -
  OCV24_RS14370 luxP 8101..9186 (-) 1086 WP_017058675.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  OCV24_RS14375 - 9492..9806 (-) 315 WP_017058676.1 GIY-YIG nuclease family protein -
  OCV24_RS14380 - 9807..10463 (-) 657 WP_017058677.1 YceH family protein -
  OCV24_RS14385 - 10528..10728 (-) 201 WP_017058678.1 hypothetical protein -
  OCV24_RS14390 - 10923..11237 (+) 315 WP_004730049.1 DUF496 family protein -
  OCV24_RS14395 - 11334..13580 (-) 2247 Protein_12 ATP-binding protein -
  OCV24_RS20810 - 13652..13931 (-) 280 Protein_13 hybrid sensor histidine kinase/response regulator -

Sequence

Protein


Download         Length: 361 a.a.        Molecular weight: 41104.32 Da        Isoelectric Point: 5.1561

>NTDB_id=92165 OCV24_RS14370 WP_017058675.1 8101..9186(-) (luxP) [Vibrio kanaloae strain LMG 20539]
MKRLLMLFGITVFSTSALSHALNGYWEYQDYLSKFPKQKILTDKMVEAVQNHPVPLRLVQDRPITISVVYPGQQISDYWV
RNIQAFEKRLDKLRINYQINQVFTRVNADINQQSISLQEAVENKTDYLIFTLDTTRHRKFIEHVLSYTDTKLILQNITTP
VRAWADRQPFMYVGFDHATGSLKLADYFKEVSQPDSQYSVLYRSEGYISDARGDTFIREVNSDTNFALKSSFYTKSDKES
SYQAAKISIENDKNLDFIYACSTDVALGAAEAIRESGRDILVNGWGGGSAELEAIESGDLDVTVMRMNDDTGIAMAEAIK
WDLSGLKVPTVYSGEFEVVTSEDSPERISELKKRAFRYSGQ

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=92165 OCV24_RS14370 WP_017058675.1 8101..9186(-) (luxP) [Vibrio kanaloae strain LMG 20539]
ATGAAACGTTTACTTATGTTGTTTGGAATTACCGTATTTTCTACGTCCGCTCTTTCCCACGCTCTCAATGGATATTGGGA
ATATCAAGATTACCTCTCTAAGTTTCCAAAGCAAAAAATATTGACCGATAAAATGGTCGAAGCTGTTCAAAACCACCCCG
TGCCATTGAGGTTAGTTCAAGATAGGCCTATTACTATTTCAGTCGTGTACCCTGGTCAACAGATTTCTGACTACTGGGTG
CGTAATATTCAAGCGTTTGAAAAGCGCCTCGATAAATTGAGAATCAACTACCAGATCAATCAGGTTTTTACACGTGTTAA
TGCTGATATCAATCAACAGAGTATTTCTCTACAAGAAGCGGTTGAAAATAAAACTGATTATTTAATTTTTACGTTAGATA
CGACGCGACACCGTAAATTTATTGAACATGTGCTGAGTTATACGGATACCAAACTGATCTTGCAAAATATTACCACTCCT
GTGCGTGCGTGGGCTGATAGACAGCCGTTTATGTATGTAGGTTTTGATCATGCGACAGGGAGTTTGAAATTGGCGGACTA
TTTTAAAGAAGTGAGTCAACCAGACAGTCAGTACTCTGTTCTTTATCGTTCAGAAGGTTATATAAGTGATGCTCGTGGAG
ATACCTTTATTCGTGAAGTGAACTCCGATACAAATTTTGCACTTAAGTCTTCGTTTTACACCAAGTCTGATAAAGAGAGC
AGTTACCAAGCGGCTAAAATCAGCATAGAGAACGATAAAAACCTAGACTTTATCTATGCATGTTCAACAGATGTTGCTTT
GGGAGCCGCTGAAGCGATTCGTGAGTCTGGTAGGGATATCTTAGTCAATGGTTGGGGAGGCGGATCGGCAGAACTCGAAG
CAATCGAAAGTGGGGACCTAGATGTGACAGTTATGCGTATGAATGACGATACTGGGATTGCGATGGCAGAGGCAATCAAA
TGGGATCTCAGTGGCTTGAAAGTTCCTACCGTTTACTCCGGTGAGTTTGAAGTGGTGACCAGCGAAGATTCCCCAGAACG
TATTTCTGAGCTTAAGAAGCGCGCATTTAGGTACTCAGGTCAATAA

Domains

Predicted by InterproScan.

Periplasmic binding protein domain (Peripla_BP_4)

(66-319)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2N7JG46

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxP Vibrio cholerae strain A1552

62.259

100

0.626

Multiple sequence alignment