Detailed information NTG0921592

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: VP467_RS10195
• Genome accession: NZ_CP142102
• Coordinates: 2126503..2127204 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain C20AB01
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2121503..2132204

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VP467_RS10165 (VP467_10165)	-	2121809..2122252 (-)	444	WP_001246675.1	SRPBCC family protein	-
VP467_RS10170 (VP467_10170)	tadA	2122322..2122825 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
VP467_RS10175 (VP467_10175)	-	2122832..2123956 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
VP467_RS10180 (VP467_10180)	ung	2123953..2124666 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
VP467_RS10185 (VP467_10185)	-	2124717..2125313 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
VP467_RS10190 (VP467_10190)	gspK	2125544..2126503 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
VP467_RS10195 (VP467_10195)	xcpW	2126503..2127204 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
VP467_RS10200 (VP467_10200)	xcpV	2127204..2127584 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
VP467_RS10205 (VP467_10205)	-	2127574..2128128 (-)	555	WP_000841373.1	type II secretion system protein	-
VP467_RS10210 (VP467_10210)	-	2128138..2128746 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
VP467_RS10215 (VP467_10215)	-	2128784..2129557 (-)	774	WP_000497298.1	TatD family hydrolase	-
VP467_RS10220 (VP467_10220)	-	2129575..2129916 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
VP467_RS10225 (VP467_10225)	-	2129928..2130908 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
VP467_RS10230 (VP467_10230)	kdsB	2130920..2131681 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=921592 VP467_RS10195 WP_000594589.1 2126503..2127204(-) (xcpW) [Acinetobacter baumannii strain C20AB01]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=921592 VP467_RS10195 WP_000594589.1 2126503..2127204(-) (xcpW) [Acinetobacter baumannii strain C20AB01]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996