Detailed information NTG0092145

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OCV24_RS02925
• Genome accession: NZ_AP025497
• Coordinates: 597722..601111 (-)
• Length: 1129 a.a.
• NCBI ID: WP_150878351.1
• Uniprot ID: -
• Organism: Vibrio kanaloae strain LMG 20539
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 592722..606111

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCV24_RS02910	-	593134..594159 (-)	1026	WP_017056648.1	ABC transporter permease	-
OCV24_RS02915	-	594162..595148 (-)	987	WP_017056649.1	ABC transporter permease	-
OCV24_RS02920	-	595318..597006 (-)	1689	WP_150878353.1	ABC transporter substrate-binding protein	-
OCV24_RS02925	chiS	597722..601111 (-)	3390	WP_150878351.1	response regulator	Regulator
OCV24_RS02930	rsmC	601328..602350 (-)	1023	WP_017056652.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OCV24_RS02935	-	602460..603545 (-)	1086	WP_060468551.1	AI-2E family transporter	-
OCV24_RS02940	hemL	603889..605184 (-)	1296	WP_017056655.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OCV24_RS02945	erpA	605470..605811 (+)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127308.78 Da
• Isoelectric Point: 5.3106

>NTDB_id=92145 OCV24_RS02925 WP_150878351.1 597722..601111(-) (chiS) [Vibrio kanaloae strain LMG 20539]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESNSFIGSERYRLLHKRYHNAYLELLKRSDF
DDILLIDINGNVAYSVSKHDDYGTNLLTGKYKDSNLGTTFQQLKKDVTDRRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGDDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFDNTQDQA
IIAAYTPIELKYATWALVVELPEEEAFSRIHQLEKIFVIVMLTAIILVFVSSHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMQLIRSQNDELEDNLKTIQKQNEELHLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGSKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLVQAGQDAG
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQEELQNYSKSGNYSHFQAPDLIDNTQQEDSVINENP
DGPLLVIADDEPVNLRVLDSFLKLEGFRVRTACDGPETIEIIEKEKPELLLLDIMMPGMSGYQVCETLRKQYDHAQLPII
MLTALNQAEDRVRGFEVGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICTRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKIEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRVNNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRIADKASGEGKNKQELMREVLVDAMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=92145 OCV24_RS02925 WP_150878351.1 597722..601111(-) (chiS) [Vibrio kanaloae strain LMG 20539]
ATGTTTAGATTCTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAATACTCTAATGCTGGCATTTCTTGTCCTCAGTATTAC
CCCAGTGACACTAATCGCAATATTCTTCCTCCAGTCGCACAGTCAAGATCTACAGGAACAAAGCACCTCACATCTTGTTT
CGGTTCGTGATACTAAGCAACAGCAAATCGTCGATTACCTTCAAGCTCAAGAGTCCCAAGTCATGGGATTTGTACGATCA
GAACTGGCTAATGCCAGTGGTGGGCGATTCTATGGATTGATCAATGCATTTCAAAGGCTCGGCCTAGATATTGACGAAGC
ACGTAGCAATGCACAGCAGCGTTATATTCAAGGATCAGGCGATCAAATCAAAACATCTATTCTTCCAGAATCGAACAGTT
TTATTGGCAGTGAGCGTTATCGCCTACTACACAAACGCTACCACAACGCTTACCTAGAACTGCTTAAGCGCTCTGATTTT
GACGATATCTTATTGATTGATATCAACGGTAACGTCGCTTATTCCGTATCTAAGCATGATGATTATGGCACCAATTTACT
GACCGGTAAGTACAAGGATTCAAACCTAGGCACTACCTTTCAACAACTAAAAAAAGACGTAACCGACCGACGCAAATCTA
ATGAGGATTACACGCCTGTTATTGTCTCTGACTTTAAAGACGAGAATGGTAAACAAACAGCATGGTTAGGTGCGCCTATC
GTACAGCAGGGCTATCTGCACAGCTATGCGATGTTTAGATTACCGATCAACGGCATAACGAAACTTATCGCGGATCTCAA
CAAGAGTTCAAATATTCAGACGCTGCTTGTGGGTGATGATCACCTGCCGCGTAGCCTTGCGCATTCGCAAGAATCGATCA
ACTTAAGCCTAGACGTTGTTGATAAAGCGCTTGCGGGCGAAACTGCAGTGGGTACGTTCGATAACACTCAAGATCAAGCG
ATCATAGCTGCCTATACGCCAATTGAACTCAAATATGCAACTTGGGCTCTCGTTGTCGAGTTGCCAGAGGAAGAAGCATT
TTCCCGAATTCACCAGCTAGAAAAGATCTTCGTAATCGTAATGTTAACTGCAATCATTCTTGTATTTGTTTCATCGCATT
ACCTATCCAACTTCATCACATCGCCGCTCCTCAAACTCACTTGGGCAGCCGAGAAAGTATCTGCTGGTGATCTTGATGAA
ACGATGATCAATACCGAGCGAAAAGATGAGATAGGCCGCCTTGCAGTAAGCTTCGAACGAATGCAGCGCTCAATTCGCGA
AAAGATGCAGCTGATAAGAAGCCAGAATGATGAACTTGAGGACAACCTTAAGACCATTCAAAAGCAAAACGAAGAGTTGC
ACCTTGCTAACAAACTAAAAGATGAGTTCTTAGCGACGACTTCTCACGAACTTAGAACACCACTGCATGGGATGGTTGGT
ATTGCCGAAGCACTAATATCTGGTGCGAACGGTCCAATTCCAGCTAACCAGAAATACCAGCTAGATATCATCATTAATAG
TGGTCAGAGACTAGCAACACTGGTTGATGACCTGCTTGATTACCACAAAATGCGCTACGGCAGCTTGGATATTAAGAAAT
CTGCAGTTGATCTGTCTGCAGCAACCAGCTTGGTGCTTGAGCTGTCACATCACCTGCTGGGTAGTAAACCAATCCGCATT
ATTAACCAAGTTCCTAGTGATTTGGGGCTAGTTTCATCTGACCCTCAACGCCTTGAGCAAGTGATGTATAACTTGGTCGG
TAATGCCATCAAGTACACATCAGAAGGTAAGATAGTCATCTCTGCAAGCGTTATTGACGACAACATTCGCGTGCAAGTTG
TTGATACCGGACAAGGTATACCCGCTGAGTATCTAGAGCACATCTTTGAACCCTTAGTTCAAGCAGGTCAAGATGCAGGC
AACTATCGTCAAGGTGCAGGGCTTGGGTTATCCATTAGCCGTCAACTGATTGAGCTTATGGGCGGGTCACTTTACGTAAG
TAGTCAACCGATGCTTGGCACTACCTTCAGCTTTACGCTACCTTTAGCTACGCAAGAAGAATTGCAGAACTACAGCAAGT
CTGGCAACTACTCACACTTTCAAGCTCCAGATTTAATTGATAATACTCAACAAGAAGACAGCGTTATCAATGAAAACCCT
GACGGCCCACTCTTAGTAATCGCAGATGATGAGCCAGTAAATCTAAGAGTATTAGACAGTTTCTTGAAGTTAGAAGGTTT
TCGAGTTCGTACCGCATGTGACGGCCCAGAAACCATTGAAATAATTGAAAAAGAGAAGCCTGAATTACTTCTACTCGACA
TCATGATGCCTGGTATGAGTGGCTACCAGGTTTGTGAGACACTGCGTAAACAATATGACCATGCACAGTTACCAATTATC
ATGCTTACGGCGCTTAACCAGGCAGAGGACCGAGTGCGAGGCTTCGAAGTCGGAGCCAATGACTACTTATCCAAGCCATT
CAACAAACAAGAGTTAGCCGCTCGAATTACTGCGCACCTATCAGCAAGCAAAGCTGAGCAAAGACGACTTGAAAATGACC
AACTGCAACTAGAGCTTAAACACAGAGCCATGGTTGAAGCTAATTTACTAGAGACACAAGGACGTTTACTAGAACAGTTA
GAATCAGCCCCTGAAGCCATTATATGTACTCGTGATGATCAACGTATTCGCTTCGCCAACGAAGCAGCAGCGAAACTCTT
TAGGCGTGGGCAAGAGCAACTTAAGCGTTCAATGGCTGACGAAATCATTGCTCCTAAGTACCTCAAAATAGAACAAGCCC
ACTACTGCGGTGATATTGATATCTACATAGATGACACACGTCAGCGCATTCCAAGTGATATCCTTAAGCTACCTGAAGGC
TCAGGGCTCGACACCATGTACATCTTCAATGTGGGTGGTGGCGTTAACTCAAACCGAGTCAATAACCTTGAAACGGCGGT
TGAGGCACTTTCAAGCTACGCCTTTGAAGGTGACAAAGATAAGCTCCAACAGCTGAAAGAGCTCGGAGGTGAGTTTACTC
GTATCGCAGATAAAGCGAGCGGTGAAGGTAAAAATAAACAGGAATTAATGCGTGAAGTATTGGTTGATGCCATGACCAAT
GCCATCATTTACTGGGAATCAGTAACAGGTGAAACTAAGTTTGCCTTCGCAGAGAAGAGTGGCTTGTGGCGCGTCTACTT
AGACCGCAGTACGCTGCAAACTCGAACACTAGACAAATACCTACGCGTAGAAACCCTACCGAAAACGCCTCGCTGGCGAA
CGGTACTGAGCTCAATCGAATTCATACTGGAACACTGCAAAGAACAGACGCCAGAAAGAACCCACATTGAGATGCTAAGG
GATAAACTTCAGAAACTACTGACCAGTTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (726-836)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• PAS domain (PAS_8) (880-914)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• HAMP domain (HAMP) (375-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	75.554	100	0.756