Detailed information    

insolico Bioinformatically predicted

Overview


Name   cinA   Type   Machinery gene
Locus tag   AB3453_RS06450 Genome accession   NZ_CP162420
Coordinates   1260955..1262106 (-) Length   383 a.a.
NCBI ID   WP_000020361.1    Uniprot ID   A0A0H2XEJ4
Organism   Staphylococcus aureus strain TUM22741     
Function   unknown (predicted from homology)   
Unclear

Genomic Context


Location: 1255955..1267106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3453_RS06430 (AB3453_06430) - 1256351..1257148 (-) 798 WP_001222105.1 TIGR00282 family metallophosphoesterase -
  AB3453_RS06435 (AB3453_06435) - 1257322..1257537 (+) 216 WP_000026308.1 hypothetical protein -
  AB3453_RS06440 (AB3453_06440) rny 1257834..1259393 (-) 1560 WP_001050913.1 ribonuclease Y -
  AB3453_RS06445 (AB3453_06445) recA 1259747..1260790 (-) 1044 WP_000368166.1 recombinase RecA Machinery gene
  AB3453_RS06450 (AB3453_06450) cinA 1260955..1262106 (-) 1152 WP_000020361.1 CinA family nicotinamide mononucleotide deamidase-related protein Machinery gene
  AB3453_RS06455 (AB3453_06455) pgsA 1262333..1262911 (-) 579 WP_001025093.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  AB3453_RS06460 (AB3453_06460) - 1262945..1263337 (-) 393 WP_341261291.1 RodZ family helix-turn-helix domain-containing protein -
  AB3453_RS06465 (AB3453_06465) - 1263356..1264183 (-) 828 WP_000214890.1 YmfK family protein -
  AB3453_RS06470 (AB3453_06470) - 1264288..1264992 (-) 705 WP_000646231.1 SDR family NAD(P)-dependent oxidoreductase -
  AB3453_RS06475 (AB3453_06475) - 1264992..1266278 (-) 1287 WP_000664780.1 pitrilysin family protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 43267.55 Da        Isoelectric Point: 6.1914

>NTDB_id=921282 AB3453_RS06450 WP_000020361.1 1260955..1262106(-) (cinA) [Staphylococcus aureus strain TUM22741]
MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHT
VAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLTNHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
KNELLSHFINHNRIIHSELLRFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFV
NKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=921282 AB3453_RS06450 WP_000020361.1 1260955..1262106(-) (cinA) [Staphylococcus aureus strain TUM22741]
ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACCAACGGACAATTTCTATCTAA
AGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAAGTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTAC
GTCATGCGCTAGAAAAATATGATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAAAGCTATTTTGAGGAACAAGG
ACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTAATTGAAGGTTCAACTGTATTAACAAATCATCATGGCATGG
CTCCAGGAATGATGGTGAATTTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTG
AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACATTCTGAACTATTAAGATTTGCGGGAATAGGTGA
ATCTAAAGTAGAAACAATATTAATAGATCTTATCGATAAACAGACTAATCCTACGATTGCGCCTTTGGCGGGAAGTCATG
AAGTATATATTAGATTGACTGCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAACAAGAAATT
CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTAATAAAGAAAATTCATGAACC
TTTTGTAATATATGATGGTATTACTAATGGTGCTTTATATCATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGG
GTATGATTAATCACAATGAAAACTTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTGTTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTCCATATAGGCTATGATAATAACTT
TGAATTTAAAACTGAGCAATTTAAAATGTCTAAATCTAGAAATTTATTAAAGAACAGAAGTCAAAATTATGCGCTCATAA
GATTATTAAATTGGCTTAGAACAACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2XEJ4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

40.146

100

0.431