Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   VML59_RS18030 Genome accession   NZ_CP142003
Coordinates   3498618..3499076 (+) Length   152 a.a.
NCBI ID   WP_000804868.1    Uniprot ID   A0A0J1HZV6
Organism   Bacillus pacificus strain AT31     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3493618..3504076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VML59_RS18015 - 3494290..3494526 (+) 237 WP_000283744.1 hypothetical protein -
  VML59_RS18020 - 3494686..3496794 (-) 2109 WP_014893533.1 polyphosphate kinase -
  VML59_RS18025 ppx 3496902..3498440 (-) 1539 WP_000658869.1 exopolyphosphatase -
  VML59_RS18030 kre 3498618..3499076 (+) 459 WP_000804868.1 YkyB family protein Regulator
  VML59_RS18035 - 3499108..3499770 (-) 663 WP_088106429.1 YkyA family protein -
  VML59_RS18040 - 3500401..3501042 (-) 642 WP_000680842.1 diguanylate cyclase domain-containing protein -
  VML59_RS18045 - 3501205..3501450 (+) 246 WP_041184500.1 hypothetical protein -
  VML59_RS18050 - 3501390..3501890 (-) 501 WP_000708167.1 hypothetical protein -
  VML59_RS18055 - 3502316..3503857 (+) 1542 WP_074567406.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17787.52 Da        Isoelectric Point: 10.6793

>NTDB_id=920816 VML59_RS18030 WP_000804868.1 3498618..3499076(+) (kre) [Bacillus pacificus strain AT31]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=920816 VML59_RS18030 WP_000804868.1 3498618..3499076(+) (kre) [Bacillus pacificus strain AT31]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATACTGGTTAAAAAAGACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J1HZV6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493