Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   VML59_RS06030 Genome accession   NZ_CP142003
Coordinates   1194991..1195167 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus pacificus strain AT31     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1189991..1200167
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VML59_RS06010 - 1192507..1192770 (-) 264 WP_000264678.1 hypothetical protein -
  VML59_RS06015 - 1192962..1193144 (-) 183 WP_001211115.1 YjzD family protein -
  VML59_RS06020 - 1193301..1194035 (+) 735 WP_000028715.1 hydrolase -
  VML59_RS06025 - 1194065..1194937 (+) 873 WP_000486158.1 NAD-dependent epimerase/dehydratase family protein -
  VML59_RS06030 comZ 1194991..1195167 (+) 177 WP_001986215.1 ComZ family protein Regulator
  VML59_RS06035 fabH 1195399..1196331 (+) 933 WP_001100536.1 beta-ketoacyl-ACP synthase III -
  VML59_RS06040 fabF 1196362..1197600 (+) 1239 WP_000412655.1 beta-ketoacyl-ACP synthase II -
  VML59_RS06045 - 1197707..1198495 (+) 789 WP_000539320.1 DUF2268 domain-containing protein -
  VML59_RS06050 - 1198639..1199385 (+) 747 WP_000966125.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=920801 VML59_RS06030 WP_001986215.1 1194991..1195167(+) (comZ) [Bacillus pacificus strain AT31]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=920801 VML59_RS06030 WP_001986215.1 1194991..1195167(+) (comZ) [Bacillus pacificus strain AT31]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCTAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586