Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   VDS58_RS06830 Genome accession   NZ_CP141997
Coordinates   1293488..1294144 (+) Length   218 a.a.
NCBI ID   WP_015252354.1    Uniprot ID   -
Organism   Bacillus subtilis strain PM0031     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1288488..1299144
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VDS58_RS06800 (VDS58_06800) oppF 1288953..1289870 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  VDS58_RS06805 (VDS58_06805) yjbB 1289977..1291194 (+) 1218 WP_080019554.1 MFS transporter -
  VDS58_RS06810 (VDS58_06810) yjbC 1291358..1291936 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  VDS58_RS06815 (VDS58_06815) spx 1292117..1292512 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  VDS58_RS06820 (VDS58_06820) yjbE 1292555..1293211 (-) 657 WP_015252355.1 TerC family protein -
  VDS58_RS06825 (VDS58_06825) - 1293381..1293521 (+) 141 WP_119122854.1 hypothetical protein -
  VDS58_RS06830 (VDS58_06830) mecA 1293488..1294144 (+) 657 WP_015252354.1 adaptor protein MecA Regulator
  VDS58_RS06835 (VDS58_06835) - 1294139..1294261 (-) 123 WP_003245684.1 hypothetical protein -
  VDS58_RS06840 (VDS58_06840) coiA 1294305..1295456 (+) 1152 WP_044052564.1 competence protein CoiA Machinery gene
  VDS58_RS06845 (VDS58_06845) pepF 1295686..1297515 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  VDS58_RS06850 (VDS58_06850) - 1297553..1297720 (-) 168 WP_003244944.1 hypothetical protein -
  VDS58_RS06855 (VDS58_06855) spxH 1298035..1298934 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25716.53 Da        Isoelectric Point: 4.0841

>NTDB_id=920709 VDS58_RS06830 WP_015252354.1 1293488..1294144(+) (mecA) [Bacillus subtilis strain PM0031]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFGNMTDEEVENQLSILLEYANESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=920709 VDS58_RS06830 WP_015252354.1 1293488..1294144(+) (mecA) [Bacillus subtilis strain PM0031]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTATTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTGGCAATATGACTGATGAAGAGGTTGAAAATCAACTAAGCATCCTGCTGGAGTACGCAAA
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

98.624

100

0.986