Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   VK758_RS06735 Genome accession   NZ_CP141897
Coordinates   1337926..1338552 (-) Length   208 a.a.
NCBI ID   WP_041910603.1    Uniprot ID   A0A8E1RPS6
Organism   Enterobacter bugandensis strain Eltt.P1     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1332926..1343552
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VK758_RS06720 (VK758_06720) helD 1333163..1335217 (-) 2055 WP_324662222.1 DNA helicase IV -
  VK758_RS06725 (VK758_06725) - 1335341..1335787 (+) 447 WP_207119164.1 YccF domain-containing protein -
  VK758_RS06730 (VK758_06730) yccS 1335807..1337969 (+) 2163 WP_041910602.1 YccS family putative transporter -
  VK758_RS06735 (VK758_06735) sxy/tfoX 1337926..1338552 (-) 627 WP_041910603.1 TfoX/Sxy family DNA transformation protein Regulator
  VK758_RS06740 (VK758_06740) sulA 1338770..1339279 (+) 510 WP_049136533.1 SOS-induced cell division inhibitor SulA -
  VK758_RS06745 (VK758_06745) ompA 1339634..1340689 (+) 1056 WP_108780329.1 porin OmpA -
  VK758_RS06750 (VK758_06750) matP 1340753..1341205 (-) 453 WP_023332611.1 macrodomain Ter protein MatP -
  VK758_RS06755 (VK758_06755) - 1341391..1343151 (+) 1761 WP_320700288.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.61 Da        Isoelectric Point: 9.2151

>NTDB_id=920405 VK758_RS06735 WP_041910603.1 1337926..1338552(-) (sxy/tfoX) [Enterobacter bugandensis strain Eltt.P1]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSEGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSTFALNAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARESWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPLENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=920405 VK758_RS06735 WP_041910603.1 1337926..1338552(-) (sxy/tfoX) [Enterobacter bugandensis strain Eltt.P1]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTGTCACCACTGGGTGAAATTCATCATCGCGCGCT
GTTCGGCGGCTATACCCTGGCAGTGGATGATGCGGTTTTTGCCATGGTGTCAGAAGGTGAGCTCTACCTCCGTGCCTGTG
AAGAAAGTGCGAAATACTGTGTGAAAAATGCCGCGTCTTTTTTGACCCTGATGAAGCGGGGCCGTCCGGTGCTTCTCAAC
TATTACCGGGTGGATGACGGGCTATGGCAGGACAGGGAGCGTCTGCTTCAGCTCTCCACTTTCGCACTTAATGCGGCAAG
AAAAGAGCGTTACCAGCGGCATCAGCGCAATCGACTTAAGGACCTGCCAAACCTGACCTTTCAGCTGGAAGTGCTACTCT
TTGAAGCGGGCATCACCAACGAAGAAACACTGCGGGCGCTTGGCGCAAGGGAGAGCTGGCTGAAGATGCGGGCGAAAAAT
AAAGCGCTGAGTATCAAAGTGCTATTCGCGCTGGAAGGGGCGATCGAGGGGCTGCATGAGGCGGCACTCCCGGCCGGCAT
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACTGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.081

95.192

0.553