Detailed information NTG0920367

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB3N46_RS21405
• Genome accession: NZ_CP162161
• Coordinates: 4376369..4377394 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain STS63-2-E
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4371369..4382394

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3N46_RS21380 (AB3N46_21385)	metJ	4371806..4372123 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AB3N46_RS21385 (AB3N46_21390)	yiiX	4372307..4372915 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
AB3N46_RS21390 (AB3N46_21395)	-	4372922..4373545 (+)	624	WP_000720774.1	TIGR02117 family protein	-
AB3N46_RS21395 (AB3N46_21400)	rpmE	4373600..4373812 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AB3N46_RS21400 (AB3N46_21405)	priA	4374015..4376213 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
AB3N46_RS21405 (AB3N46_21410)	cytR	4376369..4377394 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AB3N46_RS21410 (AB3N46_21415)	ftsN	4377486..4378445 (+)	960	WP_000068828.1	cell division protein FtsN	-
AB3N46_RS21415 (AB3N46_21420)	hslV	4378538..4379068 (+)	531	WP_032247388.1	ATP-dependent protease subunit HslV	-
AB3N46_RS21420 (AB3N46_21425)	hslU	4379078..4380409 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AB3N46_RS21425 (AB3N46_21430)	menA	4380476..4381402 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AB3N46_RS21430 (AB3N46_21435)	rraA	4381495..4381980 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AB3N46_RS21435 (AB3N46_21440)	zapB	4382065..4382310 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=920367 AB3N46_RS21405 WP_000644904.1 4376369..4377394(+) (cytR) [Escherichia coli strain STS63-2-E]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=920367 AB3N46_RS21405 WP_000644904.1 4376369..4377394(+) (cytR) [Escherichia coli strain STS63-2-E]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628