Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   VDS57_RS16340 Genome accession   NZ_CP141839
Coordinates   3079996..3080652 (+) Length   218 a.a.
NCBI ID   WP_014479448.1    Uniprot ID   A0A165B643
Organism   Bacillus subtilis strain PN1236     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3074996..3085652
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VDS57_RS16310 (VDS57_16310) oppF 3075460..3076377 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  VDS57_RS16315 (VDS57_16315) yjbB 3076485..3077702 (+) 1218 WP_072592593.1 MFS transporter -
  VDS57_RS16320 (VDS57_16320) yjbC 3077866..3078444 (+) 579 Protein_3146 GNAT family N-acetyltransferase -
  VDS57_RS16325 (VDS57_16325) spx 3078625..3079020 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  VDS57_RS16330 (VDS57_16330) yjbE 3079063..3079719 (-) 657 WP_014479447.1 TerC family protein -
  VDS57_RS16335 (VDS57_16335) - 3079889..3080029 (+) 141 WP_119122854.1 hypothetical protein -
  VDS57_RS16340 (VDS57_16340) mecA 3079996..3080652 (+) 657 WP_014479448.1 adaptor protein MecA Regulator
  VDS57_RS16345 (VDS57_16345) - 3080647..3080769 (-) 123 WP_003245684.1 hypothetical protein -
  VDS57_RS16350 (VDS57_16350) coiA 3080813..3081964 (+) 1152 WP_014479449.1 competence protein CoiA Machinery gene
  VDS57_RS16355 (VDS57_16355) pepF 3082194..3084023 (+) 1830 WP_173401378.1 oligoendopeptidase F -
  VDS57_RS16360 (VDS57_16360) - 3084061..3084228 (-) 168 WP_003244944.1 hypothetical protein -
  VDS57_RS16365 (VDS57_16365) spxH 3084543..3085442 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25733.66 Da        Isoelectric Point: 4.1174

>NTDB_id=920172 VDS57_RS16340 WP_014479448.1 3079996..3080652(+) (mecA) [Bacillus subtilis strain PN1236]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALEAIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=920172 VDS57_RS16340 WP_014479448.1 3079996..3080652(+) (mecA) [Bacillus subtilis strain PN1236]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTATTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAAATTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAGCGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-211)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A165B643

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.541

100

0.995