Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | VDS57_RS10000 | Genome accession | NZ_CP141839 |
| Coordinates | 1882445..1882735 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain PN1236 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1877445..1887735
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VDS57_RS09960 (VDS57_09960) | darA | 1877468..1877797 (+) | 330 | WP_088272133.1 | cyclic di-AMP receptor DarA | - |
| VDS57_RS09965 (VDS57_09965) | yaaR | 1877810..1878250 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| VDS57_RS09970 (VDS57_09970) | holB | 1878262..1879251 (+) | 990 | WP_088272134.1 | DNA polymerase III subunit delta' | - |
| VDS57_RS09975 (VDS57_09975) | ricT | 1879254..1880081 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| VDS57_RS09980 (VDS57_09980) | yabA | 1880096..1880455 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| VDS57_RS09985 (VDS57_09985) | trmNF | 1880514..1881257 (+) | 744 | WP_041338388.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| VDS57_RS09990 (VDS57_09990) | yazA | 1881244..1881543 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| VDS57_RS09995 (VDS57_09995) | rsmI | 1881518..1882396 (+) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| VDS57_RS10000 (VDS57_10000) | abrB | 1882445..1882735 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| VDS57_RS10005 (VDS57_10005) | metG | 1883230..1885224 (+) | 1995 | WP_129134154.1 | methionine--tRNA ligase | - |
| VDS57_RS10010 (VDS57_10010) | dayD | 1885304..1886071 (+) | 768 | WP_014478595.1 | TatD family hydrolase | - |
| VDS57_RS10015 (VDS57_10015) | yabE | 1886227..1887540 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=920151 VDS57_RS10000 WP_003226760.1 1882445..1882735(-) (abrB) [Bacillus subtilis strain PN1236]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=920151 VDS57_RS10000 WP_003226760.1 1882445..1882735(-) (abrB) [Bacillus subtilis strain PN1236]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |