Detailed information NTG0920100

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: VA212_RS06430
• Genome accession: NZ_CP141838
• Coordinates: 1323685..1324998 (-)
• Length: 437 a.a.
• NCBI ID: WP_324660195.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain P07928
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1318685..1329998

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VA212_RS06400	nadC	1319148..1319969 (-)	822	WP_324660191.1	carboxylating nicotinate-nucleotide diphosphorylase	-
VA212_RS06405	nadA	1319969..1320979 (-)	1011	WP_324660192.1	quinolinate synthase NadA	-
VA212_RS06410	-	1320966..1321772 (-)	807	WP_140468077.1	phosphatidylserine decarboxylase	-
VA212_RS06415	-	1321769..1322272 (-)	504	WP_324660193.1	DUF6115 domain-containing protein	-
VA212_RS06420	-	1322285..1322779 (-)	495	WP_000544981.1	hypothetical protein	-
VA212_RS06425	mqnP	1322772..1323656 (-)	885	WP_324660194.1	menaquinone biosynthesis prenyltransferase MqnP	-
VA212_RS06430	comEC/comE3	1323685..1324998 (-)	1314	WP_324660195.1	ComEC/Rec2 family competence protein	Machinery gene
VA212_RS06435	-	1324995..1326455 (-)	1461	WP_324660196.1	replicative DNA helicase	-
VA212_RS06440	-	1326466..1327860 (-)	1395	WP_324660197.1	NAD(P)H-hydrate dehydratase	-
VA212_RS06445	crdS	1327863..1329065 (-)	1203	WP_324661446.1	copper-sensing histidine kinase CrdS	-
VA212_RS06450	crdR	1329031..1329672 (-)	642	WP_180518480.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50041.08 Da
• Isoelectric Point: 9.8515

>NTDB_id=920100 VA212_RS06430 WP_324660195.1 1323685..1324998(-) (comEC/comE3) [Helicobacter pylori strain P07928]
MKDKTFQGAFELLATPKEYLLCGVILSLLLALNLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYATIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKNSSFLARSLQVISLS
ALVFLNMLIIVHAFFPMFSPYQLFSILLGLIFIVFFPLSLLLHAVGLGSLLDGILNMPLTIPTISVFSPLWLLGVHLFLT
ILSVRFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=920100 VA212_RS06430 WP_324660195.1 1323685..1324998(-) (comEC/comE3) [Helicobacter pylori strain P07928]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTGCAACCCCCAAAGAATACTTGTTGTGTGGGGTTATTTTAAG
CCTTTTGTTAGCGCTCAATCTTTATTTAGAATATTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTGTTGCAATACCCCAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATGATC
TTTTATGCCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCACAATTTTTTGGCAAAATCAAACCTTGCTC
ATTTTTGGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACGCGAAAACAAGATTTCAAATCGCATT
GGCGCCATTTCATTGACAGCGCTCATTCAAGCGCTTTAGTGGGGAATTTGTATCGAGCGTTGTTTATAGGGGATAGCTTG
AATAAAGACTTAAGGGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTTCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTCCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTATTGCTATTGGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTGTTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAGCTTTTGATTTTAGCGTG
CTGTATCGCTATAGCGTTACTCCCTAAACTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTGTTTTTAAAACACACTCAAGCCTTTTTTAAAAACTCTTCTTTTTTGGCGCGATCTCTTCAGGTCATAAGCTTAAGC
GCGCTAGTGTTTTTAAACATGCTCATCATTGTGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCT
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTACTCTTGCATGCTGTGGGTTTGGGGTCTTTGTTGGATGGTA
TTTTAAACATGCCTTTAACAATCCCTACGATTTCGGTTTTTTCGCCTTTATGGCTTTTAGGGGTGCATTTATTTTTAACG
ATTTTGAGTGTGCGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGTTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-392)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	94.737	100	0.947