Detailed information NTG0092006

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OCV50_RS11615
• Genome accession: NZ_AP025487
• Coordinates: 2665592..2668981 (+)
• Length: 1129 a.a.
• NCBI ID: WP_239841175.1
• Uniprot ID: -
• Organism: Vibrio fortis strain LMG 21557
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2660592..2673981

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCV50_RS11595	erpA	2660935..2661276 (-)	342	WP_032551754.1	iron-sulfur cluster insertion protein ErpA	-
OCV50_RS11600	hemL	2661574..2662863 (+)	1290	WP_239841172.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OCV50_RS11605	-	2663174..2664259 (+)	1086	WP_239841173.1	AI-2E family transporter	-
OCV50_RS11610	rsmC	2664352..2665374 (+)	1023	WP_239841174.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OCV50_RS11615	chiS	2665592..2668981 (+)	3390	WP_239841175.1	response regulator	Regulator
OCV50_RS11620	-	2669831..2671513 (+)	1683	WP_150869235.1	ABC transporter substrate-binding protein	-
OCV50_RS11625	-	2671684..2672670 (+)	987	WP_261903119.1	ABC transporter permease	-
OCV50_RS11630	-	2672673..2673698 (+)	1026	WP_239841176.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 126988.62 Da
• Isoelectric Point: 5.3605

>NTDB_id=92006 OCV50_RS11615 WP_239841175.1 2665592..2668981(+) (chiS) [Vibrio fortis strain LMG 21557]
MFRFYRKQKFKRLQSTLMLAFLVLSLTPVTLIAVFFLQSHSQDLQEQSTSHLVSVRDTKQQQIMDYLQAQESQVIGFVRS
ELAIASGGRFYGLINAFQRLGLDIEEARSNAQQRYIQGSGNEVKTSILPESSSYVGSERYRLLHKRYHNAYLELIKRADF
DDILLVDINGNVAYSVFKQDNYGTNLLTGKYKDSNLGLTFQKLAKDVTEKRKTNEDYTPVIVSDFLDENGKQSAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNMQTLLVGSDHLPRSLAHSQQAIDLSLGVIDKALAGETAVGTFDNSLDQA
IIAAYAPIELDYAQWALVVELPEKEAFARIHQLEKIFVIVMLTAIVLVFVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
AMINTERKDEIGRLAVSFERMQRSIREKMGLIKSQNEELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPSNQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGSKPIRI
INQVPADLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
SYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLATQEELDHYNESGNYSHFQAPEVLESNQQDNSEIHEDP
DGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCETLRKQHDHAQLPII
MLTALNQPEDRVRGFEVGANDYLSKPFNKQELAARITAHLSASKAEQRRIENDQLQQELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFKRSQEQLKRSMADEIIAPKYLRVDQAHYCGEIDVYISDTRQRVSSDILKLPEG
SGLDTMYIFNVGGAVNSNRINNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKAAGEGKNKQELMREVLVEAMTN
ALIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSLEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=92006 OCV50_RS11615 WP_239841175.1 2665592..2668981(+) (chiS) [Vibrio fortis strain LMG 21557]
ATGTTTAGATTTTATCGAAAGCAGAAGTTTAAGCGCCTTCAAAGTACGCTCATGCTAGCGTTTCTCGTATTAAGTTTGAC
GCCTGTTACTCTCATTGCTGTTTTTTTCCTTCAATCTCATAGTCAAGACCTACAAGAGCAGAGCACCTCTCACTTAGTGT
CCGTGCGTGATACTAAGCAGCAACAGATCATGGATTACCTTCAGGCACAAGAGTCTCAAGTGATTGGCTTTGTTCGTTCA
GAGTTGGCTATCGCCAGTGGTGGACGCTTTTACGGCCTTATTAACGCATTCCAGCGTCTCGGCCTAGACATCGAAGAGGC
GCGCAGCAATGCACAACAACGCTACATCCAAGGCTCAGGTAATGAAGTAAAAACGTCAATACTGCCTGAATCAAGCAGCT
ACGTTGGTAGTGAGCGTTATCGCCTGCTCCACAAGCGCTACCACAACGCCTATCTTGAACTGATTAAACGTGCCGATTTT
GACGATATTCTATTGGTCGACATTAACGGCAACGTCGCCTATTCCGTATTTAAGCAAGACAACTACGGTACTAACCTGCT
AACAGGCAAATACAAAGACTCAAATCTTGGCCTGACTTTCCAAAAGCTCGCGAAGGACGTCACAGAGAAACGCAAGACCA
ACGAAGATTACACACCAGTCATCGTCTCTGATTTCTTGGACGAAAACGGCAAGCAGAGCGCTTGGTTAGGTGCTCCGATT
GTTCAGCAAGGCTATCTGCATAGCTACGCGATGTTCCGACTACCAATTAACGGCATCACCAAGCTGATAGCTGATCTCAA
CAAGAGCTCAAACATGCAAACCCTACTTGTTGGTAGCGATCACCTACCGAGAAGTCTGGCGCATTCCCAACAAGCTATCG
ACCTCAGCTTAGGTGTTATAGATAAGGCCCTAGCGGGCGAGACGGCGGTTGGTACATTCGACAACAGCCTAGATCAAGCC
ATCATTGCGGCTTACGCACCGATCGAGCTGGATTATGCGCAATGGGCACTGGTTGTTGAGCTTCCAGAGAAAGAAGCTTT
TGCTCGCATTCATCAGCTAGAGAAAATCTTTGTGATCGTAATGCTGACGGCCATTGTGTTGGTGTTTGTTGCATCACACT
ACCTATCAAACTTCATTACCTCACCACTTCTCAAACTCACTTGGGCCGCAGAGAAAGTATCGGCAGGAGATCTTGATGAA
GCGATGATCAATACCGAACGAAAAGACGAGATTGGACGCTTAGCAGTGAGCTTTGAGCGCATGCAGCGTTCGATCCGTGA
GAAGATGGGCTTGATAAAATCTCAAAATGAAGAGCTTGAGGACAACCTTAAGACCATTCAAAAACAGAATGAAGAGTTAC
AATTAGCCAATAAACTCAAAGATGAATTCCTAGCAACGACGTCGCACGAGCTGCGTACACCTCTGCATGGAATGGTTGGT
ATTGCCGAAGCACTCATCTCAGGTGCCAACGGCCCTATTCCATCAAACCAAAAGTACCAATTGGATATCATCATCAACAG
TGGTCAGCGCCTTGCGACTCTGGTTGATGACCTGCTCGATTATCACAAAATGCGTTATGGCAGTTTAGACATTAAAAAGT
CAGCGGTTGATCTTTCCGCCGCCACTAGTTTGGTACTGGAGCTATCTCACCATCTGCTTGGCAGTAAACCGATTCGTATC
ATCAACCAAGTTCCGGCAGATTTAGGCCTTGTATCGTCCGATCCACAACGCCTTGAACAGGTGATGTACAACTTGGTTGG
TAACGCTATCAAGTACACCTCTGAGGGTAAAATCGTTATCTCAGCAAGCGTGATTGACGATAATATCCGTGTTCAAGTGG
TTGATACTGGCCAAGGTATCCCGGCTGAGCATTTAGAGCACATCTTTGAACCACTCATTCAAGCAGGGCAAGATGCGAGC
TCATACCGACAAGGTGCAGGCCTTGGTCTATCGATCAGCCGTCAACTGATTGAACTTATGGGCGGCTCACTCTACGTCAG
CAGTCAGCCAATGGTCGGGACAACATTCAGCTTTACTCTGCCTCTGGCAACACAGGAAGAGCTTGACCACTACAACGAGT
CGGGCAATTACTCACACTTCCAAGCACCAGAAGTATTAGAGAGTAACCAGCAAGACAACAGTGAAATACACGAAGACCCA
GATGGTCCGCTGCTTGTGATTGCTGATGATGAACCGGTTAACTTACGTGTGCTTGATAGCTTCTTGAAGCTTGAAGGGTA
CCGTGTCCGCACGGCTTGTGATGGGCCTGAAACCATTGAACTGATTGAAAAAGAGAAGCCTGAGCTGCTACTTCTCGACA
TCATGATGCCAGGTATGAGCGGCTATCAAGTGTGTGAAACATTACGAAAGCAGCATGACCACGCACAATTGCCAATCATT
ATGCTGACTGCTTTAAACCAACCTGAAGACCGCGTACGAGGCTTTGAGGTTGGGGCGAATGATTACCTGTCGAAGCCATT
CAACAAGCAAGAGCTAGCGGCGCGAATCACAGCGCACCTATCCGCAAGTAAAGCAGAGCAACGACGTATCGAGAACGACC
AGCTACAGCAAGAGCTGAAACATCGCGCAATGGTAGAGGCCAACTTGCTTGAAACCCAAGGCCGTCTACTTGAGCAATTA
GAATCAGCGCCTGAAGCGATTATCTGTATTCGCGATGATCAACGCATTCGTTTTGCTAACGAAGCTGCCGCTAAACTATT
TAAACGTAGTCAGGAGCAGCTCAAGCGTTCTATGGCAGATGAAATCATTGCACCGAAGTACTTACGTGTAGATCAAGCGC
ACTATTGCGGCGAGATTGATGTCTATATAAGTGATACCCGCCAACGAGTTTCAAGTGACATTCTGAAGCTTCCAGAAGGC
TCTGGGTTAGACACCATGTACATCTTCAATGTTGGTGGTGCTGTAAACTCAAATCGTATCAATAACCTAGAAACCGCTGT
AGAAGCGCTGTCGAGCTATGCCTTTGAAGGTGACAAAGACAAGCTGCAACAACTGAAAGAGCTAGGCGGCGAATTCACTC
GCCTTGCTGATAAAGCCGCAGGAGAAGGTAAGAATAAACAAGAACTGATGCGTGAAGTGCTGGTAGAAGCCATGACTAAT
GCCCTAATCTATTGGGAATCGGTCACTGGAGAGACCAAGTTTGCCTTCGCTGAAAAAAGTGGCCTGTGGCGCGTTTATCT
CGATAGAAGCACCCTTCAGACTCGAACGCTAGATAAGTACTTACGCGTAGAAACGCTGCCTAAAACACCTCGTTGGCGCA
CAGTACTGAGCTCTCTTGAATTTATCCTAGAGCACTGTAAAGAACAGACACCAGAAAGAACGCACATTGAGATGCTCAGA
GACAAGCTCCAAAAGCTTCTCACTAGCTAA

Domains

Predicted by InterproScan.

• PAS domain (PAS_8) (880-916)

• Response regulator receiver domain (Response_reg) (726-836)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• HAMP domain (HAMP) (375-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.705	100	0.767