Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   VO177_RS19540 Genome accession   NZ_CP141828
Coordinates   3904082..3904273 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain TZS01     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3899082..3909273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VO177_RS19515 (VO177_19515) - 3899440..3900426 (-) 987 WP_061862067.1 ABC transporter ATP-binding protein -
  VO177_RS19520 (VO177_19520) - 3900600..3901385 (-) 786 WP_095060850.1 DUF2268 domain-containing protein -
  VO177_RS19525 (VO177_19525) fabF 3901468..3902706 (-) 1239 WP_021494977.1 beta-ketoacyl-ACP synthase II -
  VO177_RS19530 (VO177_19530) - 3902729..3903667 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  VO177_RS19535 (VO177_19535) - 3903835..3904053 (+) 219 WP_007610579.1 hypothetical protein -
  VO177_RS19540 (VO177_19540) comZ 3904082..3904273 (-) 192 WP_003155061.1 ComZ family protein Regulator
  VO177_RS19545 (VO177_19545) med 3904286..3905239 (-) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  VO177_RS19550 (VO177_19550) - 3905330..3905896 (-) 567 WP_017417444.1 hypothetical protein -
  VO177_RS19555 (VO177_19555) - 3905979..3906713 (-) 735 WP_022553564.1 hypothetical protein -
  VO177_RS19560 (VO177_19560) - 3906973..3907158 (+) 186 WP_007409129.1 YjzD family protein -
  VO177_RS19565 (VO177_19565) - 3907195..3907374 (-) 180 WP_003155070.1 YjzC family protein -
  VO177_RS19570 (VO177_19570) argF 3907450..3908421 (-) 972 WP_324658806.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=919996 VO177_RS19540 WP_003155061.1 3904082..3904273(-) (comZ) [Bacillus velezensis strain TZS01]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=919996 VO177_RS19540 WP_003155061.1 3904082..3904273(-) (comZ) [Bacillus velezensis strain TZS01]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794