Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   VO177_RS18155 Genome accession   NZ_CP141828
Coordinates   3650478..3650942 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain TZS01     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3645478..3655942
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VO177_RS18130 (VO177_18130) - 3645988..3646536 (-) 549 WP_324658789.1 hypothetical protein -
  VO177_RS18135 (VO177_18135) fadH 3646647..3647411 (-) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  VO177_RS18140 (VO177_18140) - 3647555..3648418 (+) 864 WP_095059970.1 metallophosphoesterase -
  VO177_RS18145 (VO177_18145) - 3648493..3648987 (+) 495 WP_094296114.1 L,D-transpeptidase family protein -
  VO177_RS18150 (VO177_18150) - 3649063..3650355 (+) 1293 WP_014417606.1 MFS transporter -
  VO177_RS18155 (VO177_18155) kre 3650478..3650942 (+) 465 WP_003154622.1 YkyB family protein Regulator
  VO177_RS18160 (VO177_18160) cheV 3650985..3651896 (-) 912 WP_029973673.1 chemotaxis protein CheV -
  VO177_RS18165 (VO177_18165) - 3652085..3652246 (+) 162 WP_007409608.1 hypothetical protein -
  VO177_RS18170 (VO177_18170) - 3652447..3653660 (+) 1214 Protein_3539 aminotransferase A -
  VO177_RS18175 (VO177_18175) - 3653641..3655461 (-) 1821 WP_021493759.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=919989 VO177_RS18155 WP_003154622.1 3650478..3650942(+) (kre) [Bacillus velezensis strain TZS01]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=919989 VO177_RS18155 WP_003154622.1 3650478..3650942(+) (kre) [Bacillus velezensis strain TZS01]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929