Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   VO177_RS01955 Genome accession   NZ_CP141828
Coordinates   382440..383393 (-) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain TZS01     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 377440..388393
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VO177_RS01935 (VO177_01935) - 378319..379743 (+) 1425 WP_103527148.1 MDR family MFS transporter -
  VO177_RS01940 (VO177_01940) - 379785..380729 (-) 945 WP_021495116.1 siderophore ABC transporter substrate-binding protein -
  VO177_RS01945 (VO177_01945) - 380751..381509 (-) 759 WP_324658972.1 ABC transporter ATP-binding protein -
  VO177_RS01950 (VO177_01950) - 381503..382450 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  VO177_RS01955 (VO177_01955) ceuB 382440..383393 (-) 954 WP_015239156.1 ABC transporter permease Machinery gene
  VO177_RS01960 (VO177_01960) - 383807..385171 (+) 1365 WP_014416903.1 aspartate kinase -
  VO177_RS01965 (VO177_01965) - 385251..385361 (+) 111 WP_369878517.1 YjcZ family sporulation protein -
  VO177_RS01970 (VO177_01970) phrC 385512..385631 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  VO177_RS01975 (VO177_01975) rapC 385615..386763 (-) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  VO177_RS01980 (VO177_01980) - 386922..388349 (-) 1428 WP_089072406.1 sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=919931 VO177_RS01955 WP_015239156.1 382440..383393(-) (ceuB) [Bacillus velezensis strain TZS01]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=919931 VO177_RS01955 WP_015239156.1 382440..383393(-) (ceuB) [Bacillus velezensis strain TZS01]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTATTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTTTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536