Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   VO179_RS18820 Genome accession   NZ_CP141827
Coordinates   3890953..3891144 (+) Length   63 a.a.
NCBI ID   WP_047477800.1    Uniprot ID   -
Organism   Bacillus velezensis strain XHA14     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3885953..3896144
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VO179_RS18790 (VO179_18790) argF 3886805..3887776 (+) 972 WP_039252015.1 ornithine carbamoyltransferase -
  VO179_RS18795 (VO179_18795) - 3887852..3888031 (+) 180 WP_003155070.1 YjzC family protein -
  VO179_RS18800 (VO179_18800) - 3888068..3888253 (-) 186 WP_003155069.1 YjzD family protein -
  VO179_RS18805 (VO179_18805) - 3888514..3889248 (+) 735 WP_094032933.1 hypothetical protein -
  VO179_RS18810 (VO179_18810) - 3889331..3889897 (+) 567 WP_251248637.1 hypothetical protein -
  VO179_RS18815 (VO179_18815) med 3889987..3890940 (+) 954 WP_015417205.1 BMP family ABC transporter substrate-binding protein Regulator
  VO179_RS18820 (VO179_18820) comZ 3890953..3891144 (+) 192 WP_047477800.1 ComZ family protein Regulator
  VO179_RS18825 (VO179_18825) - 3891173..3891391 (-) 219 WP_007409123.1 hypothetical protein -
  VO179_RS18830 (VO179_18830) - 3891559..3892497 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  VO179_RS18835 (VO179_18835) fabF 3892520..3893758 (+) 1239 WP_015417206.1 beta-ketoacyl-ACP synthase II -
  VO179_RS18840 (VO179_18840) - 3893841..3894626 (+) 786 WP_061046904.1 DUF2268 domain-containing protein -
  VO179_RS18845 (VO179_18845) - 3894800..3895786 (+) 987 WP_025284553.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7202.39 Da        Isoelectric Point: 4.4963

>NTDB_id=919925 VO179_RS18820 WP_047477800.1 3890953..3891144(+) (comZ) [Bacillus velezensis strain XHA14]
MQHEKSLEFMQIAMKYLPKAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=919925 VO179_RS18820 WP_047477800.1 3890953..3891144(+) (comZ) [Bacillus velezensis strain XHA14]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGAAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

84.483

92.063

0.778